Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi318g00010 ATGCAAATGTCTCAGAAGCACCCAAGTTCAGCTGGTATCCACTTCTATCACCCTCACCAGCCTGTGCAAGGCATTTATCAAGTATTACAAAGCAAAAGATGCCGTGATACCCATGGTAATAGCAGCCAGGGAACTAATGTTTCTATTGAAACCTGCAAGGAGCAATATTTCACCCTGGAATCATGCCCATCAGTCACTGGTTTCATGGAATGTGATTCCCCTTCCTATGCCAGCGTATCATCGAACAGGAGTCCATTCTCTTCACAAGATTCTCAGTCATGGTATTCAGATCATCACCAGTCATCTGACAACACCTGTGGATCACCAATTAGCGGGTTGTCAAGTGTTGATGATGGGAATGAATTGAAGCACAAACTTAGAGAACTGGAGATTTCACTGTTGGGGCCTGATGAATCAGATATTGTTGACAGTTGTGGCTGCTGTGTTGAGGGTGGCCTCCACCGAGCATCTCAATCAGCAAAATATGATTGGGATCGGATTGCAGAAAATATTTCAAAGCTTGACTTGAAAGAAGTCCTCATGCTATGTGCACAGGCTGTGTCTGATGAAGATATTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGTGAAGATGGTATCAGTTGCTGGAGATCCATCCCAAAGGTTGGGTGCTTACTTGTTGGAGGGACTTAGAGCAAGGTTGGAATCATCAGGGAGTCTGATCTACAAGACCTTGAAGTGTGAACAACCAACAAGCCAAGAACTAATGAGGCACACAGTGGCATTTACTTATCCAGGCTCTTGCACACAGGCCTGGTGGACCCCTTTTGTTCGGATAACTGGTGTTGATGATTCCCAATCATTTCACGCTAGGGGTGGAGGACTTGAGATTGTAGGAGCACGGCTTTCAGATTTTGCCAGGTCTTGCGGGGTTCCATTTGAGTTCCATTGTGCTGCAATGTCTGGCTGTGAGGTTCAACGAGAAAATCTTGGAGTTAGACCTGGGGAAGCTCTGGCTGTAAATTTTCCTTTTGTTTTGCATCACATGCCAGATGAGAGTGTGAGCATAGAGAATCATCGAGACAGACTGTTGAGATTGGTTAAGAGCTTGTCTCCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAACACTTCACCTTTTTTTCACAGGTTTGTTGAGACCCTGGATTATTATACAGCTATGTTTGAATCAATAGATGTGGCTTGCCCCAGAGATGATAAGAAGCGGATTAGTGCAGAGCAGCACTGTGTGGCAAGAGACATTGTCAACATGATAGCCTGTGAGGGGATTGAGAGGGTGGAAAGGCATGAACTTTTTGGAAAGTGGAGGTTAAGATTTTCCATGGCTGGATTTAAACAATGCCCATTGAGTTCTTCAGTGATGGCTGCTGCCCAAAATCTCTTGAAGAACTTCAATCAAAACTATAGGCTTGAACAGAGAGATGGTGCTCTCTGCCTTGGTTGGATGAAGAGAGCTATGGCCACCTCTTCTGCTTGGAGGTGA 1515 0.4508 MQMSQKHPSSAGIHFYHPHQPVQGIYQVLQSKRCRDTHGNSSQGTNVSIETCKEQYFTLESCPSVTGFMECDSPSYASVSSNRSPFSSQDSQSWYSDHHQSSDNTCGSPISGLSSVDDGNELKHKLRELEISLLGPDESDIVDSCGCCVEGGLHRASQSAKYDWDRIAENISKLDLKEVLMLCAQAVSDEDIPTARGWMDNVLVKMVSVAGDPSQRLGAYLLEGLRARLESSGSLIYKTLKCEQPTSQELMRHTVAFTYPGSCTQAWWTPFVRITGVDDSQSFHARGGGLEIVGARLSDFARSCGVPFEFHCAAMSGCEVQRENLGVRPGEALAVNFPFVLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGIERVERHELFGKWRLRFSMAGFKQCPLSSSVMAAAQNLLKNFNQNYRLEQRDGALCLGWMKRAMATSSAWR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi318g00010 504 Coils Coil 465 485 - -
Sebi318g00010 504 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 116 252 IPR005202 -
Sebi318g00010 504 Pfam GRAS domain family 269 504 IPR005202 -
Sebi318g00010 504 Pfam GRAS domain family 176 256 IPR005202 -
Sebi318g00010 504 ProSiteProfiles GRAS family profile. 167 504 IPR005202 -
Sebi318g00010 504 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi318g00010 Sebi-Chr318 94473 96114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi318g00010 1 504 GRAS Transcription Factor Family AT4G17230 52.007 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi318g00010 GRAS 7.9e-82 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi318g00010 - - gmx:100776109 773.467