Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi316g00010 ATGATGTGGGAAGAAGCTATCCAGCGTCCTCCTCCCTTGATCTCTATTCTGCACAAGTATTTATTCTTAGTTACTGATATTTTCAAAGGATCCGCAGCGAAATCGGAATGGAAAGCCTCACCGGATCCGTTCATTTTTGGAAGCTTTGGATTCCAATCAAAGATAGGTTCTCCACCTGATTTCTCAAAGCTCTCTGGACGCGATGACAACATCAACGCCATCTGGAGTTCCAGTTCCTCCGAAGACTTACGCAGCGGAGACAGTGAGGATGAACCGATCGGAAGACCAAGGATCTTGACCGACATTCCGAGGCCAGAGCTCTCTATTCCAGCTATAACGGACGAACAAGAGAAGGTGGATGACACAGAGGAAGATGAAAGAATTGAAGCCGATGTTGAGCTTGAGGGTGAAACCATCGAGCCTGATGATGATCCTCCGCAGAATGCCATTGCTCATTTCAATGGCGGTCAGCAGCAGCCTCCCTCTGCCGTTGCGTGTCCGCCTCCTCCGGCTTCTCCCCAACGCCGTCCTTCTTCCAGATTTGCTCTTACATCTCCTTCTCGTTCTTGGCAGCCAGCTTCTTCTGGTCGCAGTGGTCCATTATCGTGCGGAACTCTCGAAACCGAAGTCAAGGTAACTGTCTACGAGATCTTCGTCACCGCTTATTGCACCTCCTCTGGTAAGCCTCTAAGTTTCGTTCTCAAATCGTCCTCGAACTCTAACAATTTCGTGGTAGAAAAGAATCTGTGTGCACAGCTTCAGTTTGATGAAAGGTTCATTACTATTGGAGCTCGTATACCGAAAGGAGTTCTTCTTGTTGGTCCTCCAGATATTATGTCTTGGAGCTCTACAACCACTACATATTTTTTGTTGGCTTGTCTGTATAATGCTGGTCTCCTTGAGAATTTGAGTGTGGAAGATTGGCGGTGGTGGTGGAAGGCTTTGTTTGCTTCATTTGTATGGTTTTTGCATAGATGGAAAACTAATGTTTTTGCACGGACGTTATCCAGTCAAAGTTTACTTGGACTTGATAGGGAGAAATTGCTTGCTCTAGACAAAATCTCATCCATTGGTCTATTTGTGATTGGTATAATGGCTTTGGCTGAGACTTGTGGTTACATAGGCTCTATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAGGAACTCAAAACTTGCTGATGTAAATATTCACTACCATGAAGATGAAAATGCACCTACCAGAACTTGTGTTGTTTGTGTAATTGGTGGTGAAAGGTCTCTTGTCGCCAACTTATCAGCCGCAAATTGCTACAAGTCTGAACATGCTGCCCCATTTATCTGTGAGTTCTTCAGGGATGTACAGGAAAAGGCTTTGCAATATATGGACTTCGTTTTTGGAAATGAGACTGAAGCTGCAGGTCGCCTATTGTATCTCAAATTGGGGTACAGTCATGAGGTGGAATTATTTGTGCCTCTTGCTGTCCGTGTTTTCTGCTTCAAAAACAATACCATTTGTTGTATAGACAAGCAGAGGGTGCACCAGTTCGCAGCCACTGTTTGGAATTTGACAATGCGGGAGGAATTGTTGAGATGGCAAGCATAA 1584 0.4501 MMWEEAIQRPPPLISILHKYLFLVTDIFKGSAAKSEWKASPDPFIFGSFGFQSKIGSPPDFSKLSGRDDNINAIWSSSSSEDLRSGDSEDEPIGRPRILTDIPRPELSIPAITDEQEKVDDTEEDERIEADVELEGETIEPDDDPPQNAIAHFNGGQQQPPSAVACPPPPASPQRRPSSRFALTSPSRSWQPASSGRSGPLSCGTLETEVKVTVYEIFVTAYCTSSGKPLSFVLKSSSNSNNFVVEKNLCAQLQFDERFITIGARIPKGVLLVGPPDIMSWSSTTTTYFLLACLYNAGLLENLSVEDWRWWWKALFASFVWFLHRWKTNVFARTLSSQSLLGLDREKLLALDKISSIGLFVIGIMALAETCGYIGSIGKDKFGEEMKRNSKLADVNIHYHEDENAPTRTCVVCVIGGERSLVANLSAANCYKSEHAAPFICEFFRDVQEKALQYMDFVFGNETEAAGRLLYLKLGYSHEVELFVPLAVRVFCFKNNTICCIDKQRVHQFAATVWNLTMREELLRWQA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi316g00010 527 PANTHER ADENOSINE KINASE 369 435 IPR001805 GO:0004001|GO:0006166
Sebi316g00010 527 Gene3D - 408 424 - -
Sebi316g00010 527 Pfam pfkB family carbohydrate kinase 370 452 IPR011611 -
Sebi316g00010 527 SUPERFAMILY Ribosomal protein L6 460 519 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Sebi316g00010 527 MobiDBLite consensus disorder prediction 83 97 - -
Sebi316g00010 527 SUPERFAMILY Ribokinase-like 362 466 IPR029056 -
Sebi316g00010 527 MobiDBLite consensus disorder prediction 177 202 - -
Sebi316g00010 527 Gene3D - 368 434 IPR029056 -
Sebi316g00010 527 MobiDBLite consensus disorder prediction 117 142 - -
Sebi316g00010 527 Gene3D - 457 516 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Sebi316g00010 527 PRINTS Adenosine kinase signature 373 387 IPR001805 GO:0004001|GO:0006166
Sebi316g00010 527 PRINTS Adenosine kinase signature 404 419 IPR001805 GO:0004001|GO:0006166
Sebi316g00010 527 MobiDBLite consensus disorder prediction 76 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi316g00010 Sebi-Chr316 500418 502243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi316g00010 314 372 Mechanosensitive Ion Channel Family AT4G00290 66.102 7.29e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi316g00010 K00856 - tcc:18586420 151.369