Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi315g00046 ATGGCTGAGTTCATTGTAAAGGATGAGGTCAGAAAAGCTTTCAATAAGAATCCTGGAATTGCTGCTGGGCTTGTGAGGATGCATTTTCATGATTGCTTTATTAGAGGGTGTGATGCATCGGTGCTTCTTGATTCCACTCCCTCAAACACTGCAGAGAAAGACTCTCCAGCCAATAAACCAAGTCTTCGAGGGTTTGAAGTCATTGATAACGCTAAGGCTAAACTTGAAGCAGTGTGCAAAGGAATTGTTTCATGTGCTGACATAGTTGCATTTGCAGCAAGGGATAGTGTGGAATTAGCTGGAGGGCTTGGCTATGATGTTCCTGCAGGAAGAAGAGATGGCAGAATATCACTAGCTTCAGATACAAGAACAGACTTACCTCCTCCAACTTTCAATGTTAAACAACTAACTCAACTCTTTGCAAAGAAGGGTGCACACACCATTGGCCGCTCTCATTGCTCTGCTTTCAGTAACAGATTATACAATTTCAGTAGCACTTCAAGACAGGATCCAAGTTTAGATCCCTCATATGCAGCACTGTTGAAGCGGCAATGTCCCCAAGGTAACACAAACCCAAACTTGGTGGTTCCAATGGATCCTTCTAGCCCTGGAATTGCAGATGTAGGGTACTATATTGATATCTTGGCAAACAGAGGCCTGTTCACATCTGATCAGGCTCTCTTAACTAACACCAACACAGCCAGCCAAGTGAATGAAAATGCTAGGGATCCCTATCTATGGGCAAGCAAATTTGCAGATGCAATGGTGAAGATGGGTCAAATTAGTGTCTTAACAGGTAATGCTGGAGAGATTAGAACAAATTGCAGGGTGGTCAATAGCTGA 843 0.4342 MAEFIVKDEVRKAFNKNPGIAAGLVRMHFHDCFIRGCDASVLLDSTPSNTAEKDSPANKPSLRGFEVIDNAKAKLEAVCKGIVSCADIVAFAARDSVELAGGLGYDVPAGRRDGRISLASDTRTDLPPPTFNVKQLTQLFAKKGAHTIGRSHCSAFSNRLYNFSSTSRQDPSLDPSYAALLKRQCPQGNTNPNLVVPMDPSSPGIADVGYYIDILANRGLFTSDQALLTNTNTASQVNENARDPYLWASKFADAMVKMGQISVLTGNAGEIRTNCRVVNS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi315g00046 280 PRINTS Plant peroxidase signature 197 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Plant peroxidase signature 23 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Plant peroxidase signature 213 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Plant peroxidase signature 82 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Plant peroxidase signature 101 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Plant peroxidase signature 63 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Plant peroxidase signature 253 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 FunFam Peroxidase 127 258 - -
Sebi315g00046 280 PRINTS Haem peroxidase superfamily signature 83 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Haem peroxidase superfamily signature 21 35 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PRINTS Haem peroxidase superfamily signature 138 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 CDD secretory_peroxidase 2 278 IPR033905 GO:0004601|GO:0042744
Sebi315g00046 280 ProSiteProfiles Plant heme peroxidase family profile. 1 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 Gene3D - 2 279 - -
Sebi315g00046 280 ProSitePatterns Peroxidases active site signature. 21 32 IPR019794 GO:0004601
Sebi315g00046 280 FunFam Peroxidase 1 145 - -
Sebi315g00046 280 Pfam Peroxidase 6 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 PANTHER PEROXIDASE 25-RELATED 2 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 SUPERFAMILY Heme-dependent peroxidases 2 279 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi315g00046 280 Gene3D Peroxidase, domain 2 127 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi315g00046 Sebi-Chr315 748492 749627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi315g00046 2 280 Peroxidase AT1G05260 51.027 1.48e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi315g00046 K00430 - gmx:100779031 503.442