Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00094 ATGAATGGAAGGAACAGGTTCCCCTTTACTCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAATACATGGCTTCAGGTATCTCCATCCCACCTGATCTTCTCTTCACCATCAAAAGATGCTACTTGGACTCTCCTCTCTCTTCAAGGATTTTGTCTCACCACCCTCAACACTTTGGGTGGAACTATTTGCCAATGGGTTTGGGAAGGAAAATAGACCCAGAACCAGGGAGGTGTAGAAGAACAGATGGAAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACATCAACACCGACAACAACAAACACAGATCATGCTTCAACCCCCACAACAATCTTATCAATCACAAAAAATAGTCCTTCTTCTGCACTAACCCCAACCACTCATTCTCTCTCACCTCTTACATCTCATGACACTTACCATCATTCTTCTTCCTCTCCCCATCTTCACCACTCCTTCCTCTACCATCATCCCCCACCTTCAAGGCCTTCACCTGCTGGTTTGTCTTTCCAAGACAATGGTGCTCCCTTGTTTCTTGACACTGGTTCTTCCTCTCACAATAATAACACTGATTGCAGGAACAGGTATATTTATGGACTGAAAGAGGAGGTGGATGAGCATGCTTTCTTCACTGAACCTTCTGGGACTATGAGAAGTTTCTCCACTTCCTCTATGGATGATTCTTGGCAGCTCACACCACTGACTATAAGCTCCTCATCTTCCTCAAAACAGAGGAGCTTCTCTGCTTTATCCAATTCCAATGACAACCAAGAGTACTCTTACTTGCAACTTCAGAGCCTCAGTGACAACTCAAAACAACCACAGCAAGATCAGGGTTGCTACAGTGATATCAAATGTGAAACATTCATGAAACTTGGTAAAGAAGAACCTCAGAAAACAGTTCATCGCTTCTTTGATGAATGGCCACCTAAAAACAGAAACTCATGGCTTGATTTGGATGACAAATCATCCACCACCCAGCTTTCAATTTCCATTCCCACATCTTCTCATGATTTTACAACTTTCAGTTCCCCAACCCAACGAGATGGTTGA 1137 0.4336 MNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRCYLDSPLSSRILSHHPQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTSTPTTTNTDHASTPTTILSITKNSPSSALTPTTHSLSPLTSHDTYHHSSSSPHLHHSFLYHHPPPSRPSPAGLSFQDNGAPLFLDTGSSSHNNNTDCRNRYIYGLKEEVDEHAFFTEPSGTMRSFSTSSMDDSWQLTPLTISSSSSSKQRSFSALSNSNDNQEYSYLQLQSLSDNSKQPQQDQGCYSDIKCETFMKLGKEEPQKTVHRFFDEWPPKNRNSWLDLDDKSSTTQLSISIPTSSHDFTTFSSPTQRDG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00094 378 PANTHER GROWTH-REGULATING FACTOR 5 8 366 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sebi314g00094 378 Pfam WRC 77 119 IPR014977 -
Sebi314g00094 378 MobiDBLite consensus disorder prediction 123 199 - -
Sebi314g00094 378 MobiDBLite consensus disorder prediction 123 178 - -
Sebi314g00094 378 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi314g00094 378 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi314g00094 378 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi314g00094 378 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Sebi314g00094 378 MobiDBLite consensus disorder prediction 355 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00094 Sebi-Chr314 1148949 1150430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00094 6 119 GRF Transcription Factor Family AT3G13960 69.298 7.19e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sebi314g00094 WRC 8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00094 - - gmx:100783524 591.267