Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00091 ATGCTTAGATCACCACAAATTCTGGCTATTGTTTTCTTCATTTCTGGTTTGCTTCACCTTCTCGTTAGATTCATATGGAGACCTCAAAGTAGAGAGCTTGATGATTTGGACAATGTCACTGCTCTTCAAGGTCAAATGCAGCAACTCTTCCACCTCCATGACGCTGAGGTTGACCAGTCCTTCATTGCTACCCTCCCTATCTTCGTTTACAAAGTCATCATAGGATTGAAGAACCCTTTTGATTGTGCGGTTTGTTTGTGTGAATTTGAGGCAGAGGACAACAACCTAGCCATGCTTTTCACATGGCTCTTGTCCCACTCTACTTGTCCTCTTTGCAGAGCTAGCTTTCTCCCTGATTTCTCTGGAAACAACAACGTTGTTCCCCCATTAACAAGTTCAGTTATCACAACAAATTCTCGTCTTGGTTGCCGTGGAGAAAGCGAATTTGGATCAACCAGTGTCGATTTGCGTGGTGATTTAGCTTCAAGTGAGAATCTTGATCCAAACATAGCAGGGGATGGTGTGGAGAAAGCTGTCACAATTAAGCTGGGAAAGTACATTAACATGGATGGTGGCTATGGGGAAGGAAGTAGCACCAACAATGTAGATGCTAGAAGGTGCTTTTCTATGGGGTCATTTGCTTATGTTTTGGATGAAAGTTCCTCACTCCAGGTAATGATTGTTTAG 687 0.4309 MLRSPQILAIVFFISGLLHLLVRFIWRPQSRELDDLDNVTALQGQMQQLFHLHDAEVDQSFIATLPIFVYKVIIGLKNPFDCAVCLCEFEAEDNNLAMLFTWLLSHSTCPLCRASFLPDFSGNNNVVPPLTSSVITTNSRLGCRGESEFGSTSVDLRGDLASSENLDPNIAGDGVEKAVTIKLGKYINMDGGYGEGSSTNNVDARRCFSMGSFAYVLDESSSLQVMIV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00091 228 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 7 227 - -
Sebi314g00091 228 SUPERFAMILY RING/U-box 81 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00091 Sebi-Chr314 1120141 1120907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00091 16 227 C3H Transcription Factor Family AT2G18650 44.800 2.53e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00091 - - lja:Lj4g3v2023880.1 315.849