Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00074 ATGGAGTTTAGCGAACAAGAACGGGTGATAAATAAGATTGGGTCTGCACCGGTGAACATTATTGTTGGTTCTCATGTCTGGGTTGAAGACCCAGCACTAGCATGGATTGGTGGAGAAGTTACTAAAATCAATGGTGAAGAAGTCCATGTTCGCACTGGAAATGGGAAAACAGTTGTCAAAAATATCTCAAAGGTTTTTCCCAAGGATAATGAAGCCCCTCCTGGAGGTGTAGATGACATGACAAAATTGTCATACTTGCATGAACCAGGAGTTCTGCACAACTTGGCAACTAGATATGAACTTAATGAAATCTATACGTATACTGGAAATATCCTGATTGCGATAAACCCATTTCAAAGGTTACCACATCTATATGATACTCACATGATGGAACAATACAAAGGAGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGGGCAATGATCAATGAGGGAAAAAGCAACTCAATCCTGGTTAGCGGTGAGAGTGGTGCTGGTAAGACAGAGACAACAAAAATGCTTATGCGATATCTTGCATACCTTGGGGGCCGGTCTGGAGTAGAAGGGCGGACAGTTGAGCAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACAGTTAGAAACAATAACTCAAGTCGGTTTGGTAAATTTGTTGAGATACAATTTGACAACAAGGGAAGGATCTCTGGGGCAGCTATACGTACTTATTTGCTTGAGAGGTCCCGCGTTTGTCAAATTTCAGATCCTGAAAGAAATTACCACTGCTTTTATCTTCTTTGTGCAGCACCAGCGGAGGAAAAAGAGAGGTATAAGCTGGGACATCCTAGCTCTTTCCATTACTTAAATCAATCCAATTGCTATGCGCTGGATGGAGTGGATGATGCAGAAGAATATCTTGCGACTCGAAGGGCAATGGATGTTGTTGGAATCAGTGAGGAGGAGCAGGAGGCAATTTTTAGGGTCATTGCAGCAGTTTTGCACCTTGGAAATGTTGAATTTGCAAAAGGAGAGGAGATTGACTCTTCTGTTCTCAAAGATGAGAAGTCTAGGTTCCATCTTAATATGACTGCTGAACTTCTCAGGTGTGATGTTAAGAGCTTGGAAGATGCGCTGATCAAGCGTGTGATGGTAACGCCTGAGGAGGTTATTACAAGAACCCTTGATCCTGTTGCAGCTCTCGGTAGCAGGGATGCATTAGCTAAAACTATTTATTCACGTTTATTTGATTGGCTTGTGGAGAAGATTAACATTTCAATTGGGCAAGATCCAAATTCAAAATCTATCATTGGGGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGCTACAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATTGATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATAGCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCTACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACCATATCTCATTATGCAGGGGAGGTGACATATCTAGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTGGCAGAACATCAGGATCTTCTGACAGCCTCAAAATGCTCATTTGTGGCTGGTCTATTCCCCGCTTCTCCAGAGGAGTCTTCAAAATCATCAAAGTTCTCTTCAATAGGATCTCGCTTTAAGTTACAACTTCAATCTTTGATGGAAACCCTAAATTCAACAGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTCAAGCCTGCTATTTTTGAAAATCTCAATATTATCCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACAAGACGGACCTTTTATGAATTTCTTAATCGATTTGGTGTTCTTGCGCCTGAAGTACTTGATGGAAACTATGATGATAAGGTTGCATGCCAAATGATCCTGGATAAAATGGGTATGAAAGGCTATCAGGTGATTCAGTACTCCTTATCACTTGATATGTTGATGATGATGCATGGGAGGATAGGCAAGACAAAGGTTTTCCTAAGAGCAGGCCAGATGGCTGAGTTGGATGCAAGAAGAGCCGAGGTTCTTGGAAATGCAGCTAGAATCATCCAGAGGCAAACACGTACCCATATTGCACGCAAGGAATTCATTGAATTACGTCAAGCTGCAATTGGTTTGCAATCTAATTTGCGAGGTTTAAGGGCCATGAAGGCTCGTGATGAGTTTAGATTTAGAAAGCAAACGAAAGCTGCAATTATTATCCAGGCTCATTTGCGTCGGCAAATTGCATATTCATATTATAAAAGATTGCAAAAGGCTGCAGTTGTTACTCAATGTGGTTGGAGGAGAAGGGTTGCTAGAAAGGAACTTAGAATGCTTAAAATGGCTGCAAGAGAAACAGGGGCTCTTAAAGAGGCAAAAGACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGAAAAGGCACAAGAAATTGCTAAGTTACAAGATGCTTTACATGCAATGCAAATACAAGTTGAAGAAGCAAATGCCAGGGCCATCAAAGAGCGTGAGGCGGCACAGAAAGCCATTGAAGAAGCACCTCCAGTTATTAAGGAGACTCCTGTTATCGTTCAAGATACTGAAAAGATTAATTCTTTATTGGCTGAAGTCAATAGTTTGAAGGAATCAATGCTATTGGAAAGAGAGGCTAAAGAAGAGGCCAGAAAAGCTCAGGCTGAGGCTGAAGCTAGAAATAAGGAGCTGGTTAAGAAGGTTGAGGATTCTGACCGCAAAGTGGATCAACTCCAAGAATTAGTTCAGAGATTGGAGGAAAAATTTTCCAATTCAGAATCAGAAAATCAAGTTCTTCGCCAGCAAGCACTGGCTGTATCACCAACTGGAAAAGCTCTGTCTGCAAGACCAAGGACTGTAATTATTCAGAGGACACCAGAAAATGGGAATGCTCTAAATGGTGAAGCAAAAATTGGATCGGATATGACTCTTGCTGTATCCAATGCACGTGAGCCTGAATCTGAGGGAAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGAAAACCAGGACTTGTTGATCAAGTGCATATCACAAGATTTGGGATTTTCTGGGGGCAAACCTGTCGCTGCATGTGTCATATATAAATGTCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGAACTAGTGTCTTTGACCGTATCATTCAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAATACTGATGTATTAGCTTATTGGTTGTCTAATACATCTACTTTGCTGTTGCTACTCCAACGTACTCTCAAAGCAAGTGGAGCTGCTAGCTTAACACCACAACGACGGAGAACAGCATCATCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCTCAAAGTGCTGGATTGTCATTTTTAAATGGTCGAGGTCTTAGTAGATTGGATGACTTACGACAAGTTGAAGCAAAATATCCGGCACTTCTGTTTAAGCAACAACTCACTGCTTTCCTTGAAAAAATATATGGAATGATACGAGACAACCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATACAGGCTCCAAGGACCTCGCGTCAAGGGTTAGTAAAAGGACGCTCACATGCTAATGCGGTTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAAGCTTAAACAATTATCTAAAGATAATGAAAGCAAACTATGCGCCTCCTTTCTTGGTCCGTAAAGTGTTCACTCAAATATTCTCATTCATCAATGTTCAATTATTCAACAGCAACGGGGAGTATGTGAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCATCGAGGCAACAGAGGAGTATACTGGCTCAGCTTGGGAGGAACTGAAACATATCAGGCAGGCTGTTGGATTCCTGGTGATACATCAAAAACCCAAAAAGTCCCTGAATGAAATAACAAAGGAGCTTTGCCCTGTTCTCAGTATACAACAGTTATACAGGATAAGTACAATGTACTGGGATGACAAATACGGCACTCACAGTGTGTCTACAGACGTTATAACAAGCATGAGAGCTATGATGTCTGAGGACTCTAATAATGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCGAGCATTCCATTTTCGGTGGATGACATTTCCAAATCAATGCAACAAGTAGATGTAGCTGACGTGGATCCTCCTCCGTTGATACGTGAGAACTCAGGATTTGTGTTCTTACTAGCACGCTCGGAGTGA 4515 0.4089 MEFSEQERVINKIGSAPVNIIVGSHVWVEDPALAWIGGEVTKINGEEVHVRTGNGKTVVKNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKERYKLGHPSSFHYLNQSNCYALDGVDDAEEYLATRRAMDVVGISEEEQEAIFRVIAAVLHLGNVEFAKGEEIDSSVLKDEKSRFHLNMTAELLRCDVKSLEDALIKRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINISIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASKCSFVAGLFPASPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQMILDKMGMKGYQVIQYSLSLDMLMMMHGRIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQTRTHIARKEFIELRQAAIGLQSNLRGLRAMKARDEFRFRKQTKAAIIIQAHLRRQIAYSYYKRLQKAAVVTQCGWRRRVARKELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEIAKLQDALHAMQIQVEEANARAIKEREAAQKAIEEAPPVIKETPVIVQDTEKINSLLAEVNSLKESMLLEREAKEEARKAQAEAEARNKELVKKVEDSDRKVDQLQELVQRLEEKFSNSESENQVLRQQALAVSPTGKALSARPRTVIIQRTPENGNALNGEAKIGSDMTLAVSNAREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLSFLNGRGLSRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQALIAHWQSIVKSLNNYLKIMKANYAPPFLVRKVFTQIFSFINVQLFNSNGEYVKTGLAELEQWCIEATEEYTGSAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTDVITSMRAMMSEDSNNAVSTSFLLDDDSSIPFSVDDISKSMQQVDVADVDPPPLIRENSGFVFLLARSE 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00074 1504 SMART MYSc_2a 69 763 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 Pfam Myosin head (motor domain) 77 750 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 21 70 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 Coils Coil 862 942 - -
Sebi314g00074 1504 FunFam Class V myosin 452 594 - -
Sebi314g00074 1504 CDD MyosinXI_CBD 1098 1470 IPR037975 GO:0007015
Sebi314g00074 1504 ProSiteProfiles IQ motif profile. 816 842 IPR000048 GO:0005515
Sebi314g00074 1504 Pfam Myosin N-terminal SH3-like domain 22 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 Coils Coil 970 1036 - -
Sebi314g00074 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 805 872 IPR027417 -
Sebi314g00074 1504 Gene3D - 680 763 - -
Sebi314g00074 1504 Gene3D - 452 636 - -
Sebi314g00074 1504 ProSiteProfiles IQ motif profile. 767 791 IPR000048 GO:0005515
Sebi314g00074 1504 PANTHER MYOSIN 71 1435 - -
Sebi314g00074 1504 Gene3D Myosin VI head, motor domain, U50 subdomain 325 614 - -
Sebi314g00074 1504 Pfam DIL domain 1334 1426 IPR002710 -
Sebi314g00074 1504 ProSiteProfiles IQ motif profile. 839 868 IPR000048 GO:0005515
Sebi314g00074 1504 CDD MYSc_Myo11 89 750 IPR036018 -
Sebi314g00074 1504 Gene3D Kinesin motor domain 78 675 IPR036961 -
Sebi314g00074 1504 ProSiteProfiles Dilute domain profile. 1147 1447 IPR002710 -
Sebi314g00074 1504 ProSiteProfiles Myosin motor domain profile. 75 762 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 SMART iq_5 787 812 IPR000048 GO:0005515
Sebi314g00074 1504 SMART iq_5 838 860 IPR000048 GO:0005515
Sebi314g00074 1504 SMART iq_5 764 786 IPR000048 GO:0005515
Sebi314g00074 1504 SMART iq_5 815 837 IPR000048 GO:0005515
Sebi314g00074 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 807 IPR027417 -
Sebi314g00074 1504 FunFam unconventional myosin-Va 818 866 - -
Sebi314g00074 1504 PRINTS Myosin heavy chain signature 442 470 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 PRINTS Myosin heavy chain signature 105 124 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 PRINTS Myosin heavy chain signature 162 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 PRINTS Myosin heavy chain signature 495 523 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 PRINTS Myosin heavy chain signature 209 236 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi314g00074 1504 Pfam IQ calmodulin-binding motif 767 785 IPR000048 GO:0005515
Sebi314g00074 1504 Pfam IQ calmodulin-binding motif 817 837 IPR000048 GO:0005515
Sebi314g00074 1504 Pfam IQ calmodulin-binding motif 841 860 IPR000048 GO:0005515
Sebi314g00074 1504 Gene3D - 265 323 - -
Sebi314g00074 1504 FunFam Myosin heavy chain 265 320 - -
Sebi314g00074 1504 Gene3D - 765 817 - -
Sebi314g00074 1504 Gene3D - 818 867 - -
Sebi314g00074 1504 SMART DIL_2 1333 1429 IPR002710 -
Sebi314g00074 1504 FunFam Myosin 2 325 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00074 Sebi-Chr314 928899 944480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00074 80 1504 Myosins gene family AT5G20490 80.216 0.0 2429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00074 K10357 - gmx:100777802 2610.87