Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00070 ATGAAGAAAGGAAGCTTGGGCCTCAATCTCAAACTCTCTGTTCCTGCATCTGATCAGGCTACTTTTTCCAAGTTTCTGACTGAAAGTGGGACTTTTAAGGATGGGGATCTGCTTGTCAACAGGGATGGAGTTCGAATTGTCTCTCAGAGTGAAGTGGAAGCTCCACCTCCAATCAAGGCAACAGACGACCAGTTAAATTTGGCGGACATAGACATAATCAAAGTTGTTGGAAAGGGAAATGGAGGGGTAGTGCAATTGGTGCAACACAAATGGACTAGTCAGTTTTTTGCATTAAAGGTAATTCAAATGAATATTGAGGAGTCTATGCGCAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATTCTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCCTTAGCTGATCTTCTGAAGAAAGTAAAAACAATTCCGGAACCTTATCTTGCTGCCATCTGTAAGCAGGTGCTGAATGGTTTAATGTATCTTCACCATGAAAGACATATTATCCACAGAGACTTAAAACCTTCTAATTTGTTGATAAATCATAGAGGTGAAGTAAAGATTACTGACTTTGGTGTTAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGCACATACAACTATATGTCTCCAGAGAGAATCGCTGGAGGCCATGGTTACAACTACAAAAGTGATATATGGAGTTTGGGACTAATATTGCTAGAGTGTGCTATGGGGAGGTTTCCATATACACCACCAGATCAAAGTGAAAGATGGGAAAGTATTTTTGAGCTTATTGAAACTATCGTTGATCATCCTCCTCCTACTGCTCCATCCGAACAATTTTCTACAGAATTTTGCTCATTTGTCTCTGCATGTCTACAGAAGGACCCAAGGGATAGACTGTCGGCTCAAGAACTTATGAGGCATCCTTTCATGAGCATGTATCAGGACTTGGTTGTGGATCTTTCATCTTACTTTTCCAATGCAGGATCTCCACTTGCCACCTTATAA 1068 0.4026 MKKGSLGLNLKLSVPASDQATFSKFLTESGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKATDDQLNLADIDIIKVVGKGNGGVVQLVQHKWTSQFFALKVIQMNIEESMRKQIAQELKINQSAQCPYVVVCYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPEPYLAAICKQVLNGLMYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTYNYMSPERIAGGHGYNYKSDIWSLGLILLECAMGRFPYTPPDQSERWESIFELIETIVDHPPPTAPSEQFSTEFCSFVSACLQKDPRDRLSAQELMRHPFMSMYQDLVVDLSSYFSNAGSPLATL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00070 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Sebi314g00070 355 CDD PKc_MAPKK_plant_like 85 335 - -
Sebi314g00070 355 Gene3D Phosphorylase Kinase; domain 1 45 149 - -
Sebi314g00070 355 SUPERFAMILY Protein kinase-like (PK-like) 65 338 IPR011009 -
Sebi314g00070 355 FunFam Mitogen-activated protein kinase kinase 6 151 350 - -
Sebi314g00070 355 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Sebi314g00070 355 Pfam Protein kinase domain 72 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi314g00070 355 ProSiteProfiles Protein kinase domain profile. 70 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi314g00070 355 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Sebi314g00070 355 SMART serkin_6 70 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi314g00070 355 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 15 347 - -
Sebi314g00070 355 Gene3D Transferase(Phosphotransferase) domain 1 150 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00070 Sebi-Chr314 885536 889071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00070 1 326 MAP Kinase Kinase Gene Family AT4G29810 68.657 4.77e-175 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Sebi314g00070 Pkinase 3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00070 K20603 - gmx:100789734 627.476