Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00069 ATGGAGGAAATATCTTCCAGTGTTGCAGTGCCATTTACACTTGGAAACTTGATTCAAAAGGAGTCTGCAGTGACGACCCACATGGAGATAACTGGGATAAAGCTTATGGCAAATACAGCAGCAGCTTTAATATTGAGTCCTGCTGTTGAGGGTAGTCAATCATATTCTGTTGGAAGTGAAAACCATGCTGATGTTAGTCTGCAACACCAAATTACTGTTTCTGCAGAGGTTAAGGAAAATCAAGTTGGAGGTGTCTCAGAAATGGTTATTGAATGTGAAAGTAATTGGGTCTTGACTGAAAGCCATGATGAGGCAAGGAAGGAAGATGAATTCATGTTAGCTGTAGATTTTCAGTGTCTACATAATCCAAACTCTCAATCTGTGGCTAATGACAAAAGTGGTCCTTGTGGGGAGGAAGATGCATCCTTGAAGACTATTTATTCTGAAATTGATTCACCAATTATTATCAAGGTTGATGATAATACCTATGGTAAGTCTGGTATAAACGAGCCTCTTCCAACATTAAAGCCAGAGCAGAACTCAGTTTCTGTTGCAATGGATATTGAGAGTGAAAATCGAAGTGGTTCAGATGAGTCTGATCCACAACTATCTTCTGTGCTTCTTGATCAGTTGCCAAAGGAGAATAGAACATGGAGAACAAGCTACCAGAGTGCTTTGGAATTGAGTAATGGCCCTCTTTGGGGTTCCTCATCAATTTGTGGAAATAGACAGGAGATGGAAGATGCTATTTTTGTTAAGCCTCAACTTTTTCAAGTACCTTCACAGATGTTAATGAATGACCATGTGAATGAAAACACACAATGCTCACTAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGTTTTCAGGTTGCTAATTACTGCCGGGAGCGTCTTCATTCAGTGTTGATTGAGGAGATAGAAGCTGCACAATCAAGTTTGGCTGAAACAAATGGGAGAGATGATTGGCAGGACCATTGGAAGAAAGCATTCTCCAATTGTTTTCAGAAAGTAGATGATGAGGTTGGAGGAATTGGTGTTGGTAATAGTGAAAACAACAGTGATGATGGATCTGAGTCAAATATTGAACCTCTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGTCAAACTCACATAATAGTTGCAAATTGTGGGGATTCAAGAGCTGTCTTGTATCGTGGGAAAGAAGCCCTGCCATTGTCTGCTGATCACAAACCAAATCGAGAGGATGAGCGGGAAAGGATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCAATGTCAAGGTCCATAGGTGATAGATATTTGAAACCATGGATAATTCCAGAACCAGAAGTCAATATTGTGCGACGAGAGAAAAATGATGAGTGCCTTATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCATGTGATGTTGCAAGGAAGAGAATCCTTCTTTGGCATAAGAAGTATGGCAACAATGGAACAACAGGACAAAGTGAAGGGGTTGATCCTGCAGCTCAATCAGCTGCAGACTATCTATGTAGACTTGCCCTCCACAGAGGAAGCGATGATAACATCTCTGTAATTGTTATAGATTTAAAGGCTCAAAGAAAGTTTAAGAGAAAGGCATAA 1674 0.4098 MEEISSSVAVPFTLGNLIQKESAVTTHMEITGIKLMANTAAALILSPAVEGSQSYSVGSENHADVSLQHQITVSAEVKENQVGGVSEMVIECESNWVLTESHDEARKEDEFMLAVDFQCLHNPNSQSVANDKSGPCGEEDASLKTIYSEIDSPIIIKVDDNTYGKSGINEPLPTLKPEQNSVSVAMDIESENRSGSDESDPQLSSVLLDQLPKENRTWRTSYQSALELSNGPLWGSSSICGNRQEMEDAIFVKPQLFQVPSQMLMNDHVNENTQCSLAHFFGVYDGHGGFQVANYCRERLHSVLIEEIEAAQSSLAETNGRDDWQDHWKKAFSNCFQKVDDEVGGIGVGNSENNSDDGSESNIEPLAPETAGSTAVVAILSQTHIIVANCGDSRAVLYRGKEALPLSADHKPNREDERERIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDECLILASDGLWDVMTNEEACDVARKRILLWHKKYGNNGTTGQSEGVDPAAQSAADYLCRLALHRGSDDNISVIVIDLKAQRKFKRKA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00069 557 CDD PP2Cc 235 547 IPR001932 -
Sebi314g00069 557 PANTHER PROTEIN PHOSPHATASE 197 547 IPR015655 GO:0004722|GO:0006470
Sebi314g00069 557 SMART PP2C_4 223 545 IPR001932 -
Sebi314g00069 557 MobiDBLite consensus disorder prediction 346 366 - -
Sebi314g00069 557 FunFam Protein phosphatase 2C 16 221 557 - -
Sebi314g00069 557 Pfam Protein phosphatase 2C 236 540 IPR001932 -
Sebi314g00069 557 ProSitePatterns PPM-type phosphatase domain signature. 280 288 IPR000222 GO:0043169
Sebi314g00069 557 ProSiteProfiles PPM-type phosphatase domain profile. 233 547 IPR001932 -
Sebi314g00069 557 Gene3D - 221 557 IPR036457 -
Sebi314g00069 557 SMART PP2C_SIG_2 264 547 IPR001932 -
Sebi314g00069 557 SUPERFAMILY PP2C-like 226 548 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00069 Sebi-Chr314 882022 884382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00069 204 557 PP2C-type Phosphatase Gene Family AT1G17550 55.833 5.15e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00069 K14497 - gmx:100789207 828.55