Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00065 ATGTCCACACCGAGATCGGTTGCTGTTGCCGTCAGTGGCGGCTCCGGCGCCGCCAAGGGTAGCCGGAGAGCCGTCCAGTGGGCGGTGGATAATCTCGTTCCTCAAGCAGATAGGTTCATCTTAGTTCACGTCATCCCCACAATCACTTCAATTGCAACCCCAACTGGAGATTATATTCCCATTTCGGAAGCAGATGCTGATGCCTTTGCAGCTTATGTGGAGGATGTGAAACAAAAGTCTGAACAAATCTTTGTTTCATTCAAGAAGCTCTATGAATCAGACATGATGGAAACCTTGTTACTGGAAGATGACAATCCTGCAAATGCACTTCTTAGCTTTGTCTCTGAATCTGGGATCCAAATTTTAGTGCTGGGTTCTGACTCTTCAAATTTTATTACGAGGAAGCTAAAAGGACCTGGAATACCAACTACCATTCTAAGATGTGCTCCTGACAGCTGTGATGTATATGTTGTATCTAGAGACAAAATCATATCAAAGTTAGCTGATTCTTCATCTTCATATTCTCATGAGACTAGCCCAAGGTACTTCATGTCTGCTCAAGTAAATAAATCAGACAATAGTGCTGGCATTGGTGGAGAAATGTCTGGAATTAATTCATCCCCATTAGAACCTAAAATTCTAAAAACTTTCAGATTTTTGTCAATATCAGAGCGTAGTTACGTTGGTCTGCAAACAACTAGTCGTAGGGATTCTTTTGAACATTATACCAAAAATGAAGAAGAAAATCCAGAAAACATTGGAGATGATGTTGAAGCTTTTAGCCTCCACTCATTTGATGCCGTTTCTTCTGCACAACGTGAACAGTTAGTCATGCAAGAAGAAATGGAACGGCTGCAGGTGGAGTTGCAGAATACTATTGCTATGTATAAACAGGTTTGTGAAGACTTGGTTCATGTTCAAAGCAAGGCTGTTTTACTTTCTTCTGAGTCTCTTGAAGAAGCTCAAAGAATAAATGATTCCCTGAAAAGAGAAGAGACTTTGAGAAAGATTGCTGCTGAAGAGAAAGCAAAGTATTTAAAAGTCACAAAGGAACTTGAGGAGGCAAAAAATATGCTTGCCAAAGAATCATATGAAAGACAGATTGCTGAACTTAATGTCCTTAAAGAATCCATTGAAAGACAGAGAATTGTTGATACATTGCTCCCAAATGACAGGAGATACAGAAAATACACCATGGATGAACTCAAGACTGCGACAAACAACTTCTCTGAGAAATTGAGAATTGGTGAGGGAGGGTATGGGAAAGTTTACAAGTGCAATCTTGATCACACATCAGTAGCTGTGAAGGTTTTGAATCACGACTCAATCAACAAAAAAGAGGAGTTTCTGAAAGAGGTTGAGATTCTTAGTCAGCTACACCATCCAAATATGGTTTTGTTACTTGGAGCCTGTCCTGATAAGGGCTGCCTTGTTTATGAATACCTGGAAAATGGAAGCCTAGAAGACTATATTCTCAAAAAAAATGGAAAACCACCACTTCCTTGGTTTGTTCGATTTCGTATAGTTTTTGAAATGGCTTGTGGACTCTCATTCTTGCATAATTGGAAGCCAGAGCCTATTGTTCACCGCGATATAAAACCTGGCAATATCTTGTTGGACAGAAATTATGTGAGCAAAATTTCAGATGTTGGACTGGCCAAACTCCTTTCAGATGTTGTGCCTGACAATATCACAGAGTACAGAGAATCAGTGCTTGCTGGTACCCTGCATTACATGGACCCAGAGTATCAAAGAACTGGCACTGTACGACCAAAATCAGATGTATATGCTTATGGAGTTATAGCTCTCCAGTTGATAACTGCTCGCCATGCACGTGGACTCATTTTGACTGTTGAAGATGCAATTACAAATGGCTCCTTCAGTGACATTTTAGATAAATCAGCTGGAGATTGGCCATTGGATGAGACATTGGAATTGGCTCAAATTGCCCTTAAATGTGTTGCACTTAGATGCAGAGATAGACCAGAACTTGATGCTGAAGTTCTTCCACTGCTCACAAGACTTTCTGATAAGGCAAATGCTAGTGAAAGGATAGGAAGAAATAATATATGCACGCCAAGCCAGTATTATTGTCCAATCCTTCAGGAAATCATGGAGGAGCCATGTGTTGCTGCAGATGGTTTCACTTATGAGTACAGAGCAATCAAGGCATGGCTAAGCAGGCACAATGTGTCTCCAGTGACAAAGCTTAAACTCCCACATTCTGAGTTGACTCCAAACCATACTTTACGTTCTGCTATTCAGGAGTGGAAATCAGGAGTGACCTTTTCTCATTAG 2298 0.4073 MSTPRSVAVAVSGGSGAAKGSRRAVQWAVDNLVPQADRFILVHVIPTITSIATPTGDYIPISEADADAFAAYVEDVKQKSEQIFVSFKKLYESDMMETLLLEDDNPANALLSFVSESGIQILVLGSDSSNFITRKLKGPGIPTTILRCAPDSCDVYVVSRDKIISKLADSSSSYSHETSPRYFMSAQVNKSDNSAGIGGEMSGINSSPLEPKILKTFRFLSISERSYVGLQTTSRRDSFEHYTKNEEENPENIGDDVEAFSLHSFDAVSSAQREQLVMQEEMERLQVELQNTIAMYKQVCEDLVHVQSKAVLLSSESLEEAQRINDSLKREETLRKIAAEEKAKYLKVTKELEEAKNMLAKESYERQIAELNVLKESIERQRIVDTLLPNDRRYRKYTMDELKTATNNFSEKLRIGEGGYGKVYKCNLDHTSVAVKVLNHDSINKKEEFLKEVEILSQLHHPNMVLLLGACPDKGCLVYEYLENGSLEDYILKKNGKPPLPWFVRFRIVFEMACGLSFLHNWKPEPIVHRDIKPGNILLDRNYVSKISDVGLAKLLSDVVPDNITEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYAYGVIALQLITARHARGLILTVEDAITNGSFSDILDKSAGDWPLDETLELAQIALKCVALRCRDRPELDAEVLPLLTRLSDKANASERIGRNNICTPSQYYCPILQEIMEEPCVAADGFTYEYRAIKAWLSRHNVSPVTKLKLPHSELTPNHTLRSAIQEWKSGVTFSH 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00065 765 Gene3D Transferase(Phosphotransferase) domain 1 482 692 - -
Sebi314g00065 765 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 382 481 - -
Sebi314g00065 765 CDD STK_N 6 160 - -
Sebi314g00065 765 PANTHER OS02G0152300 PROTEIN 7 756 - -
Sebi314g00065 765 Gene3D HUPs 4 166 IPR014729 -
Sebi314g00065 765 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 161 - -
Sebi314g00065 765 Coils Coil 268 288 - -
Sebi314g00065 765 ProSiteProfiles U-box domain profile. 691 764 IPR003613 GO:0004842|GO:0016567
Sebi314g00065 765 ProSiteProfiles Protein kinase domain profile. 409 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi314g00065 765 Coils Coil 338 381 - -
Sebi314g00065 765 Pfam U-box domain 693 758 IPR003613 GO:0004842|GO:0016567
Sebi314g00065 765 SUPERFAMILY RING/U-box 692 758 - -
Sebi314g00065 765 CDD RING-Ubox_WDSUB1-like 693 747 - -
Sebi314g00065 765 SMART Ubox_2 695 757 IPR003613 GO:0004842|GO:0016567
Sebi314g00065 765 SMART serkin_6 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi314g00065 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Sebi314g00065 765 Pfam Protein tyrosine and serine/threonine kinase 414 665 IPR001245 GO:0004672|GO:0006468
Sebi314g00065 765 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 693 762 IPR013083 -
Sebi314g00065 765 SUPERFAMILY Protein kinase-like (PK-like) 392 664 IPR011009 -
Sebi314g00065 765 Pfam Universal stress protein family 20 138 IPR006016 -
Sebi314g00065 765 Gene3D Phosphorylase Kinase; domain 1 389 481 - -
Sebi314g00065 765 ProSitePatterns Protein kinases ATP-binding region signature. 415 436 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00065 Sebi-Chr314 836986 842109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00065 6 759 Plant U-box Gene Family AT5G57035 52.558 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sebi314g00065 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00065 - - gmx:100805896 1246.49