Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00048 ATGGGGGTGGTTTTGGCTCTGATGCTGCAGCTGGTGAAGCTCTGCATCATTGGCTTTGCTGTTGCAGCCCAAGGATCCAAAGGGTCCATCATATCTCCATCTCCAGTGTTCCTTCCTGTCATTCCTCCAGAAACACTTGCTCTTATCAATCATGGAGAGTTAAGGGGAAGCATTGCACCAAGTTTGCCATCAGATCCAGATGGGCGTGTTATTTCCCCATCTCCAGCAAACTTACATGTGTATTCTTCCCCTATTGAAACACCTGGTTCTTTACACCAAAGAGATTCATGGAGAACCATTTCCCCAAGCTCTCCAGCAGTACCAAATGGGTCAGTCTTTCACCCTCCAAACACATTACCACCTCCTACATCAGCTCCAATTCCTCAGAAGAGTAAAGACATTGAACCATCCATATCTCCAAGTTCAAGCCCTATAGCATTATCACCACCAAATGAAGTTGTTCCTTCACCATCAACAGTGCAAGGGAATATACCACCGTCTGCAAAAGCAAGTCCACCACCTATTGTTAGGCCTCCTTTCTACACACCAACTGCTCCAGCTCCAGTTGCAATACCTTCTGGCAGATCACCAAAAATTTCACCGGTCAGCCAACCAGCGGAACATGCAAATTTGGCACCTAAAGCTGATGATAGGAATGGAAATAAGAGTCACACTGTAGAGCCAATTTCCCCAGCACCAATTGCAACACCTTCAACCAATTTTCCCAAAAATTCATCACAGAGCCAACCAACTGGACATGGAAGTTTTCCTCCCAAAGAGGGAACAAATGAAGCCCCTGCAGCAGTTAATTTGCCAAAAAAATCACCTGTCAGCCAGCCACCTGAGCATGGAAGTCAGCCACCAAATGTCCATCAAAGGAATGCAAATACAGGTCACACCTTGGAGCCCATTTCACCAGTTGCAATACCTCCTGCAACTTCCAAAGAGAATTCAACAGTCAGCCATCCAACTCAACATGGAAGTATTCCACCTAATGTTCATAAAAGAATACAAATGAAGATCACACCCCTGGGCCAGTTTCACCAGGTAGAATCAGTTGCATCCCCACCACGGAAAGCAGAACATATCCCCCCAGTGGCCCACCCTATTTTCCCAACAATAACTCCATCCATATTATCTGCACCAGCCACGTCACCAAGAAGTGCATTTCCGGTAAATCCACCATTGGTCCATCCAATTGTTCCAGCAGTATCTCCATCAAAATTACCAGCATTTGTTCCCTCTCCCATGTCAACTCCTTCAAGAAGCATTGGTTGGAAAAGTGGTGGAGCACCAGTTGCTGCACCTTTGTACAAAACACCAAAGCCACTTCCAGCTGTAATACATTCCCCTGCTCAAGCTCCTGTTGCACAAAAAGCAAGGCAATTGCATCATGCTCCAGAGCCATTGACTTCATCCCCTAAATCTCCTTCTAATAAAGAAAATCATTTTCCTGCATTGTCACCTTCAATCTCATTTTATAAACATCATCATACAAGGAACGTGATTACCAGCCCTGCTCCTGCATCATCATATATGGTTTCTCCTCCCACTTCAAAACACCAAGATAGAGCAATTCCTCCCTCATTGTCACCAGCAAGTGGACAAAAACATCACGTTCCATTACCGATTAACTCAGCTTTTCCTCCTAAAGTATCTCCATCAGGGTCTTCTGCCATGAGCCCTGAGATGCCCCTCCTACCTCAAGTTCAAGCACTGCCACCCCCACCTCCTAATGAAGATTGTTTATCAACTGTCTGCATAGAGCCTTATGCAACTTCTCCGCCTGGAGTACCTTGCAGATGTGTCTGGCCCATGCGAGTTGGTCTTCGCATTAATGTTCCTCTCTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCACTGGAGTTTTCATGAAGCAAAGTCAAGTTCGAATTATGGGAGCCAATGCAGCAAATCAGCAACCTGAGAAAACTGTTGTCCTTATTGATTTGTTGCCACTTGGGGAAAAGTTTGATAATTCTACAGCCTTTTTGACTTCTGACAGATTTTGGCATAAAAAGGTTGTTATAAAAGCCTCCTACTTTGGAAACTATGATGTTTTATATGTGAGCTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATGGGCATGATAGATGGTGGCCCATTTTCCACTGATGACAATAATGGAACGATAATAAAGCCCCTTGGGGTTGACATACAGAAGAGTCAGCATAAAGGTGGACTCAGCAGAGGCATAATTGCCATTATTGCTGTTTCAGTTTTTCTAGCAGTTGTTTTATGTACAGCTGCCGCCTGGGTCATGTTCAAATTCAGAGATCATGTTAGTCAGCCAGCATCAACCCCACGGCTTTCAACACCTTCTCTTACCAAAGCACCAGGTACTGCTCCTGTGTCGTTAATTGGAGATGGAGGAGTTGGATCCATTTCTTCATCATTTCGATCCAGCATTGCTGCTTATACAGGGTCTGCTAAGACTTTCAGTATGAATGACATTGAGAAAGCTACTGATAATTTTCATGCTTCAAGAATACTTGGAGAAGGTGGTTTTGGGCGTGTTTACAGTGGTATCCTTGGAGAAGGGACAAAAGTGGCGGTCAAGGTTCTAATGAGGGACGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAAATGCTTAATCGTCTTCACCACAGAAATTTGGTCAAGTTGATTGGTATATGCGCAGAGAATAGCTTCCGCTGCTTGGTTTATGAACTTGTTCCAAATGGCAGTGTGGAATTCCATTTACATGGAGTTGACAAGGAAAACTGCAAACTTGATTGGGCTGCTAGGATGAAGATAGCTCTTGGTGCAGCTCGTGGTCTTGCTTATCTGCATGAAGATTCAAGTCCCCGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCCCGGACAGCAACTGATGAGGAGAATAGACACATATCAACACGTGTCATGGGAACTTTTGGTCAAGTCAAATGA 3060 0.4435 MGVVLALMLQLVKLCIIGFAVAAQGSKGSIISPSPVFLPVIPPETLALINHGELRGSIAPSLPSDPDGRVISPSPANLHVYSSPIETPGSLHQRDSWRTISPSSPAVPNGSVFHPPNTLPPPTSAPIPQKSKDIEPSISPSSSPIALSPPNEVVPSPSTVQGNIPPSAKASPPPIVRPPFYTPTAPAPVAIPSGRSPKISPVSQPAEHANLAPKADDRNGNKSHTVEPISPAPIATPSTNFPKNSSQSQPTGHGSFPPKEGTNEAPAAVNLPKKSPVSQPPEHGSQPPNVHQRNANTGHTLEPISPVAIPPATSKENSTVSHPTQHGSIPPNVHKRIQMKITPLGQFHQVESVASPPRKAEHIPPVAHPIFPTITPSILSAPATSPRSAFPVNPPLVHPIVPAVSPSKLPAFVPSPMSTPSRSIGWKSGGAPVAAPLYKTPKPLPAVIHSPAQAPVAQKARQLHHAPEPLTSSPKSPSNKENHFPALSPSISFYKHHHTRNVITSPAPASSYMVSPPTSKHQDRAIPPSLSPASGQKHHVPLPINSAFPPKVSPSGSSAMSPEMPLLPQVQALPPPPPNEDCLSTVCIEPYATSPPGVPCRCVWPMRVGLRINVPLYTFFPLVSELASEIATGVFMKQSQVRIMGANAANQQPEKTVVLIDLLPLGEKFDNSTAFLTSDRFWHKKVVIKASYFGNYDVLYVSYPGLPPSPPLPPSSMGMIDGGPFSTDDNNGTIIKPLGVDIQKSQHKGGLSRGIIAIIAVSVFLAVVLCTAAAWVMFKFRDHVSQPASTPRLSTPSLTKAPGTAPVSLIGDGGVGSISSSFRSSIAAYTGSAKTFSMNDIEKATDNFHASRILGEGGFGRVYSGILGEGTKVAVKVLMRDDHHGDREFLAEVEMLNRLHHRNLVKLIGICAENSFRCLVYELVPNGSVEFHLHGVDKENCKLDWAARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDEENRHISTRVMGTFGQVK 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00048 1019 Gene3D Transferase(Phosphotransferase) domain 1 924 1018 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 453 487 - -
Sebi314g00048 1019 FunFam receptor-like serine/threonine-protein kinase ALE2 821 923 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 311 328 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 232 256 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 83 111 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 83 332 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 469 486 - -
Sebi314g00048 1019 SUPERFAMILY Protein kinase-like (PK-like) 828 1015 IPR011009 -
Sebi314g00048 1019 ProSitePatterns Protein kinases ATP-binding region signature. 854 876 IPR017441 GO:0005524
Sebi314g00048 1019 ProSiteProfiles Protein kinase domain profile. 848 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi314g00048 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 970 982 IPR008271 GO:0004672|GO:0006468
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 134 166 - -
Sebi314g00048 1019 Pfam Protein tyrosine and serine/threonine kinase 850 1005 IPR001245 GO:0004672|GO:0006468
Sebi314g00048 1019 FunFam Protein kinase superfamily protein 924 998 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 284 301 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 506 538 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 506 525 - -
Sebi314g00048 1019 Gene3D Phosphorylase Kinase; domain 1 820 923 - -
Sebi314g00048 1019 PANTHER OS01G0750732 PROTEIN 574 1018 - -
Sebi314g00048 1019 MobiDBLite consensus disorder prediction 167 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00048 Sebi-Chr314 579101 586914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00048 353 1018 Receptor kinase-like Gene Family AT5G56890 52.542 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi314g00048 PK_Tyr_Ser-Thr 2.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00048 - - gmx:100816296 1400.96