Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi314g00038 ATGACAATATTGACCAATACGGTTGAACTTGAGCTTCAACTTCAACTAGAATGCTTGCATTCTTCCCTAATAATGCATCGAAGAGCACTCCAAGAGAAAAACCCTTCATCCCCTGTGGATTTGCAGAGCTCCTCCTCAGGAAGCCACCACTCTGAATCATTGTTCTTTTTCCTTGGAGGGGTTGTAGTGCTCATCATATTGCTGATTCTTGTGTTTGTGTTTTGGAAGCGTATTAAACGGCCAGCACAGAAGATGGAGGAAACATCTCCAAAGAGTCAGCAGCATGCAGAGGTGATGAAAATGACAGTCCCAAATGTTCAAGAGTCAGGGTTCATGGAATTCATTAGTGGAAACCTTCGGACAATTAGCTACTTTGATTTCCAGACATTGAAGAAGGCCACAAAGAATTTCCACCGAGGAAATTTTCTTGGAAGTGGTGGATTTGGACCTGTCTATCAGGGAAAATTGGCAGATGGAAGGCTGATTGCTGTTAAGAAATTGTCTCTTGACAAATCCCAACAAGGAGAAAGAGAATTTCTAGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTGGTTCGCCTTCTGGGATGTTGTACAGATGGGCCTCAAAGGATACTTGTGTATGAATACATGAAGAACAAAAGTTTGGATCTTTTCATATATGACCAAGCTTACCTTAGCACTCAGTTTGCTGGAACATTAGGTTATACTGCTCCTGAATATGCTATTAGAGGAGAACTATCAGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTTGCAGGAAAAACACAGATCTCACATTACCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGGTGATGGATCTTGTAGATCCAAAGCTGAGAGAAGATGGATTTGTAGAAAAGGATGTGATGCAGGCATTCCATGTGGCTTTCTTATGCCTGCAGCCTCTTGCGGATATGAGACCTGCCATGTCAGAGATAGTAGCATTGTTGACATTCAAAATTGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTTGATAGAAGGCGCAAAATGGATGATGAGAACCACTCTTGGGAAGCCATATCCAAGTTCTGA 1137 0.4169 MTILTNTVELELQLQLECLHSSLIMHRRALQEKNPSSPVDLQSSSSGSHHSESLFFFLGGVVVLIILLILVFVFWKRIKRPAQKMEETSPKSQQHAEVMKMTVPNVQESGFMEFISGNLRTISYFDFQTLKKATKNFHRGNFLGSGGFGPVYQGKLADGRLIAVKKLSLDKSQQGEREFLAEVRMITSIQHKNLVRLLGCCTDGPQRILVYEYMKNKSLDLFIYDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYEKSMVMDLVDPKLREDGFVEKDVMQAFHVAFLCLQPLADMRPAMSEIVALLTFKIEMVTTPMRPAFLDRRRKMDDENHSWEAISKF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi314g00038 378 Pfam Protein tyrosine and serine/threonine kinase 140 226 IPR001245 GO:0004672|GO:0006468
Sebi314g00038 378 Pfam Protein tyrosine and serine/threonine kinase 234 341 IPR001245 GO:0004672|GO:0006468
Sebi314g00038 378 Gene3D Transferase(Phosphotransferase) domain 1 209 352 - -
Sebi314g00038 378 Gene3D Phosphorylase Kinase; domain 1 92 208 - -
Sebi314g00038 378 SUPERFAMILY Protein kinase-like (PK-like) 123 362 IPR011009 -
Sebi314g00038 378 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 226 - -
Sebi314g00038 378 FunFam Cysteine-rich receptor-like protein kinase 10 101 213 - -
Sebi314g00038 378 ProSiteProfiles Protein kinase domain profile. 137 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi314g00038 Sebi-Chr314 484362 486725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi314g00038 65 364 Receptor kinase-like Gene Family AT4G23280 33.333 2.53e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi314g00038 PK_Tyr_Ser-Thr 5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi314g00038 - - gmx:100812302 368.622