LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi314g00006	ATGAGATTGGTGGAGTTTGGGAGTGTGTTGATTGTTCTATCTGTTCTTCTGGTTTCTGGGAGTGCGGAGATTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATGCTGGAGGTATTGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATTGATACCGCAAGTGAGTTTAGACACTCTAGGAACAATGAAGCCAATGGTTTAACTGTTTTTACTCACTTTGAGAAACAGAGATATTTATATTTCTTGTATGGGGCAGAAACTCTAAGACATGCTCCTGGAGTGAAATCTATTGAGAGGGACTGGAAAGTGAAAAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTATGGCCAACAGGAGGTGGCTTTGATCGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATCTACCCTCACCACCCTAGCTTTTCAACTCATAATACTGAACCATATGAGCCAGTTCCAAGATATAGAGGAAAATGTGAAGCTGATCCTGAAACTAAAAGAAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCCCATGCTGCAATAGCTGCTGGGGCATTTAACCCTTCCATTGATTTTGCATCTCCTCTAGATGGGGATGGACACGGAAGTCATACAGCCTCTATTGCAGCAGGAAACAATGGAATTCCTGTGAGAATGCATGGCCATGAATTTGGGAGAGCAAGTGGGATGGCTCCTCGTGCCAGGATTGCTGTATACAAGGCACTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTCGCTGCAATTGATCAGGCTGTATACGATGGAGTGGATATACTCAGCCTCTCAGTTGGACCCAACAGTCCTCCAGCAGCCACCAAAACTACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGGGTATTTGTTGCACAAGCTGGTGGAAATGGTGGTCCTTTTCCTAAAACAATGGTTTCATACAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATTTGATCCTTGGAAATGGAAAAATCTTAGCTGGTGTTGGGTTATCACCTTCTACACATTTAAACCAAACATACACATTGGTTGCTGCGAATGATGTGCTGCTAGATTCTTCAGTTATGAAGTACAGCCCCACAGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAGAGGGCAATATTCTTCTTTGTGGATATTCTTTCAATTTTGTTGTCGGTACTGCATCAGTCAAGAAAGTATCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTCTGTGTCGAAAACATTTCCCCCGGAACAAAATTTGATCCTGTCCCTGTTGGCCTTCCTGGAATTATTATCACAGATGTCAGCAATTCAAAGGAGCTTGTAGATTATTATAATATCTCTACACCAAGAGACTGGACTGGACGGGTGAAGAGTTTCAAAGGTACGGGTAAAATTGGTGATGGTTTGATGCCTATTCTGCATAAATCTGCACCACAGGTGGCATTGTTCTCTGCCAGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGACCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAGGGATTCGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCACATTGGAGCCCTGCTGCCATTAAATCTGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCACTTCTAGCCCAGCAAACTTCTGAAAAAGAAGCTATGGAGCTGGTCAAAGCTACTCCTTTTGATTATGGAAGTGGACATGTTGATCCAAGAGCTGCATTGGACCCTGGGCTCATCTTTGATGCAGGATACCAGGATTATCTAGGCTTCTTATGCACAACACCCGGCATTGATGTTCATGAGATAAAGAACTACACTCATGCACCATGTAACAATTCCATAGGAAAACCATCCAATTTAAACACCCCATCTATCACAATTTCCCATCTTGTGAGAACCCAAGTTGTGACCCGCACTGTCACAAATGTTGCTGAGGAAGAAACCTATGTGATCACAGCCAGAATGGAACCAGCTGTTGCCATTGAAGTCAACCCTCCTGCAATGACTATCAAAGCAGGTGCATCACGTCAGTTTTCTGTGACACTCACAGCTCGCTCAGTGACAGGAAGCTATAGTTTTGGAGAGGTTTTAATGAAAGGAAGCAGAGGGCATAAGGTGAGGATCCCTGTTCTGGCAAAAGGGTACCCACAATAG	2400	0.4363	MRLVEFGSVLIVLSVLLVSGSAEIYIVTVEGEPIISYAGGIDGFEATAVESDEKIDTASEFRHSRNNEANGLTVFTHFEKQRYLYFLYGAETLRHAPGVKSIERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFSTHNTEPYEPVPRYRGKCEADPETKRSYCNGKIVGAQHFAHAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAGGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLILGNGKILAGVGLSPSTHLNQTYTLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIEGNILLCGYSFNFVVGTASVKKVSETAKALGAVGFVLCVENISPGTKFDPVPVGLPGIIITDVSNSKELVDYYNISTPRDWTGRVKSFKGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSEKEAMELVKATPFDYGSGHVDPRAALDPGLIFDAGYQDYLGFLCTTPGIDVHEIKNYTHAPCNNSIGKPSNLNTPSITISHLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVTLTARSVTGSYSFGEVLMKGSRGHKVRIPVLAKGYPQ	799

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi314g00006	799	Pfam	Subtilase family	136	620	IPR000209	GO:0006508\|GO:0008236
	Sebi314g00006	799	CDD	PA_subtilisin_like	358	496	-	-
	Sebi314g00006	799	CDD	Peptidases_S8_3	112	615	IPR034197	-
	Sebi314g00006	799	ProSiteProfiles	Serine proteases, subtilase domain profile.	105	656	-	-
	Sebi314g00006	799	ProSitePatterns	Serine proteases, subtilase family, serine active site.	579	589	IPR023828	-
	Sebi314g00006	799	PRINTS	Subtilisin serine protease family (S8) signature	136	155	IPR015500	-
	Sebi314g00006	799	PRINTS	Subtilisin serine protease family (S8) signature	578	594	IPR015500	-
	Sebi314g00006	799	PRINTS	Subtilisin serine protease family (S8) signature	215	228	IPR015500	-
	Sebi314g00006	799	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	792	IPR045051	-
	Sebi314g00006	799	Gene3D	-	673	796	-	-
	Sebi314g00006	799	SUPERFAMILY	Subtilisin-like	111	660	IPR036852	GO:0004252\|GO:0006508
	Sebi314g00006	799	Pfam	Fibronectin type-III domain	701	793	IPR041469	-
	Sebi314g00006	799	Gene3D	Peptidase S8/S53 domain	138	669	IPR036852	GO:0004252\|GO:0006508
	Sebi314g00006	799	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	141	152	IPR023827	-
	Sebi314g00006	799	FunFam	Subtilisin-like protease SBT1.5	138	359	-	-
	Sebi314g00006	799	Gene3D	-	351	516	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi314g00006	Sebi-Chr314	80345	85947	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi314g00006	4	796	Subtilisin-like Serine Gene Family	AT4G30020	75.892	0.0	1257

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi314g00006	-		-	gmx:100787619	1414.44