Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi313g00030 ATGGGGAACAAAATCGCGCGCACAACGCAAGTTTCGGCGTCGGAGTACTACCTGCACGAGCTGCCGTCGACGTACAATCTGGTGCTGAAGGAGGTTCTCGGACGCGGTCGTTTCTTTAAGTCGATTCAATGCAAACACGACGAGGGTTTGGTCCTCGTCAAGGTTTATTTCAAGCGAGGCGATTCCCTCGATCTCTCTGACTACGAGCGCCGTCTCTCTCAAATCAAGGAAATCTTCAGGGCCATTGATCACCCTCACGTTTGGCCCTTTCAGTTTAGTTTAGATTGCTCACGTGGCAGTGTGATGATGCAGTTTTGGCAAGAAACAGATAAAGCAGCGTACCTTTTGAGGCAATATTTCTTCCATAATCTGCATGATCGACTAAGCACTAGGCCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTCCAGTTGCTTTTAGCTGTAAAACAAAGCCACGAGAAGGGAGTATGTCATGGTGATATCAAGTGTGAGAATGTGCTGATTACGTCTTCGAATTGGCTTTACCTTGCTGACTTCGCATCTTTTAAACCCACTTACATTCCATATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACTGGTGGAAGAAGACTCTGTTATCTAGCACCTGAGAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAAGCAGTCATCTGATGATGCAGGTGTTACTTCTGGTGAGCTTTTGGAAGAGATGGTTGCTAAAGAAAGTGTGAGTTTCATGAAGGATTCACTGATGAAAAGAGAGGACATAGGAAAAAGCTTAGTTCATGATCACTATGAACTTCTTGGTGATATTAATAGCCTACTGAGGGATGCTAAAAAAAATAATAATCCATCTGGTCCCCAGCATGTAACAGGAAATGCACACAATTCTAACTTCCCAGAAAATCTAAAAAATTTACAGTCTCCTGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCTTGGTACGAGATTTTCCTCCCAGTGATGCAAAGATATTTCCTGAGTATATTCTTCCTATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTAACTGCTTATGGGTTCTTGATACACTCAATGAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTCACCAAAGAAGCCATTAACATCATCCACTCAGACCTCTGGAAGAACGAATAGGATAAATAGTGATGTCCAACTTCTGCAGCTGAGGAAATCAATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGAGAGCACTTCTTCAGGACATTGGTAAACTGTGCTGCTTCTTTGGTGTGAGACAGAGTAATGACTCTCTCTTACCTATCCTTCCTGCTTTCTTAAATGATCGGGATGAACAGTTAAGGACAGTATTCTACGAAAAGATTGTTTATGTCTGCTTTTTTGTGGGACAAAGAAGTGTAGAAGAATATCTATTGCCTTACATTGAGCAAGCTTTAAGTGACATGACAGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTGACTATTCTATGCAAAAATGGGTACTTTCGGAAGAGGATATTGCTACAAATGATAGATCGTGCCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCGGCTGTCGCTTTCATTGCTGCTAGTAGTGAGAGCTTGGGTGCAGTAGATTCTTATGTTTTCCTTGCTCCTGTTATACGGCCTTTTCTTCGTAGACAACCTGTTTCTCTTGCTTCAGAGAAAGCTCTCTTGTCTTGTTTAAAACCTCCTGTCTCAAGACAGGTTTTCTATGAAGTCTTGGAGAACTCCAGGAGTTCAGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCATCACAATCTAAACTATGGGAAATGGATTTACTAAAAAAAGGAATTGATGAGTTGGATTCGATAAAGAACTGGACTGACAAGCAACAAGGTCCTGGGATTCAACAAGCTATTGGCACTACCTTCCAACAGCCAGGGCTAACTGATTGCGACAAAGCTGAAGCAAAATTGAGAGATATGGGGGCTTTTATGCATAATGATAACAACATGGTGGCACATCGTGATTCCCAGTGCTTAGAGAAGTTACAGTTTTCAGGATTTACGTCACCAATGTTCAGTGGTGTAAACAGTTTGACATATGAAAAGCCATCAGAAGGCATACCTTTGTACTCTTTCAGTGTTGACAGGCGAGGAATGGGATTACCTCCTCCTGCAGCATCTGATTCTCCACTACAAATGAATTCTCTGGGTGTTAGTTCGTCTGCAATGCCTTGGGTTAATCCACTAAGTTCTTTTAGCATCAGCAATGGTTCTAAACAGTTCCACCGAGTGGTACATGAACCAGATGCCAGGGAAAATGAGACAGCCTATGTTAATAACACATTTCAAGATGTGGGATTATCTTCTAATATTAAAGGTACTTCAATTTCACTGGAAGATGCAACTGCCCAAACTGATCTATCAGGATTTCCATCTTTTGCTCGAACATCCATTCCTGATTCTGGTTGGAGGCCCCGTGGGGTGTTGGTTGCTCACCTCCAAGAGCACCGTTCGGCTGTCAATGATATAGCGATTTCTTCTGATCAAAGCTTCTTTGTCAGTGCATCTGATGACTCTACAGTCAAGATTTGGGATTCCAGAAAGTTGGAAAAAGACATTTCATTCAGGTCAAAGCTAACTTACCACCTGGAGGGAAGTCGTTCACTATGTGCAGCAATGCTTCCAGGTTCTGCACAAGTGATAATTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAATGTTGTTGAAAAGTATTCTGGTATTGCTGATATCACAAAGAAGGATATCAAGGAAGGTGCCATACTCAACCTTTTAAATTGCCCTGTGGATAATTATACCATTATGTATAGCACCCAGAACTGTGGCATTCATCTGTGGGATACTAGGTCAAATTCCAATACCTGGACCCTGAAAGCTACTCCTGAGGAGGGCTATGCTGCTTCTCTGGCATCAGGGCCTTGCGGCAATTGGTTTGTATCAGGGTCATCCCGGGGTGTTATTACACTTTGGGATCTGAGGTTTCTTATACCTGTGAACTCTTGGAAATATTCTCTTTCTTGCCCTATAGAAAAGATGTGTCTCTTTCTTCCTCCTCCAAATGCTTCTCTGTCTTCAACTGCCAGGCCCCTTGTATATGTGGCTGCTGGTTGCAATGAAGTTTCTCTTTGGAATGCAGAAAATGCTAGCTGCCACCAGGTATTGAGGGCGGCCAATTATGACAGTGATGCAGAAATGTCTGATCTGCCTTGGGCCTTGGCCAGACCTTCAAGTAAGCCAACTTCTCAATCAGATCTCAGACGAAATATTAATCGCAAGTACGGAGTTGATGAGCTAAATGAACCTCCTCCTCGTCTTCCTGGTATTCGTTCATTACTTCCCTTGCCAGGGGGTGATTTATTGACTGGGGGCACTGATCTAAAGATACGTCGATGGGATCATTACAGTCCTGACAGAAGTTACTGCATTTGTGGACCAAACTTAAAAGGAGTAGGAAATGATGACTTTTACGAAACAAAATCTAGTTTCGGAGTGCAAGTTGTACAGAACAACTATGCCTTTCTTCTTCTCTTGAGTGGCTTCTATTCCAACTGCCAGGGATCAGCTAATGATTCCTTTGCTGAAGAAATTAGACATACCATACTAGTCAATAGCGTGCTATATCGGCGTAGCGGTGCGGAGCGGCCCCCGGCCGCTATACAAAACCTTATAGTTTCCCGCTACGCTATAGCAGTTATAGCGGCCGCTATAGCGGTATTGTTTGGGACTCAGGAGACCAAAAGACGTCCTCTTGCAACGAAGTTGACAGCGAAGGCAATTCTTGCAGCTGCTGCCACTGATTCTGCCGGTTGCCATCGTGATTCTGTTGTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACTCTTATTGTCAAGTGGTAGAGATGGAGCCATCAAGGACATCGGAGCTTGGTGTTTTGAGAAGCAGATGGACCTCAGAAGTTTCTTTGATGTGTCTTCTTGGCTGGCCTGGTGGTCTTTTAATCACATCAACGAGGGACTATTCTCTAGGTGA 4218 0.4298 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSLDLSDYERRLSQIKEIFRAIDHPHVWPFQFSLDCSRGSVMMQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPESAFQEILKQMMNKQSSDDAGVTSGELLEEMVAKESVSFMKDSLMKREDIGKSLVHDHYELLGDINSLLRDAKKNNNPSGPQHVTGNAHNSNFPENLKNLQSPAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSMSLSEAGVLDELSSPKKPLTSSTQTSGRTNRINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCCFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMTEAVIVRALECLTILCKNGYFRKRILLQMIDRAFPLLCYPSEWVRRSAVAFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIDELDSIKNWTDKQQGPGIQQAIGTTFQQPGLTDCDKAEAKLRDMGAFMHNDNNMVAHRDSQCLEKLQFSGFTSPMFSGVNSLTYEKPSEGIPLYSFSVDRRGMGLPPPAASDSPLQMNSLGVSSSAMPWVNPLSSFSISNGSKQFHRVVHEPDARENETAYVNNTFQDVGLSSNIKGTSISLEDATAQTDLSGFPSFARTSIPDSGWRPRGVLVAHLQEHRSAVNDIAISSDQSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRSLCAAMLPGSAQVIIGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDIKEGAILNLLNCPVDNYTIMYSTQNCGIHLWDTRSNSNTWTLKATPEEGYAASLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWKYSLSCPIEKMCLFLPPPNASLSSTARPLVYVAAGCNEVSLWNAENASCHQVLRAANYDSDAEMSDLPWALARPSSKPTSQSDLRRNINRKYGVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNLKGVGNDDFYETKSSFGVQVVQNNYAFLLLLSGFYSNCQGSANDSFAEEIRHTILVNSVLYRRSGAERPPAAIQNLIVSRYAIAVIAAAIAVLFGTQETKRRPLATKLTAKAILAAAATDSAGCHRDSVVSLASVKLNQRLLLSSGRDGAIKDIGAWCFEKQMDLRSFFDVSSWLAWWSFNHINEGLFSR 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi313g00030 1405 SMART WD40_4 1167 1201 IPR001680 GO:0005515
Sebi313g00030 1405 SMART WD40_4 922 959 IPR001680 GO:0005515
Sebi313g00030 1405 SMART WD40_4 1019 1060 IPR001680 GO:0005515
Sebi313g00030 1405 SMART WD40_4 872 911 IPR001680 GO:0005515
Sebi313g00030 1405 ProSiteProfiles HEAT repeat profile. 472 510 IPR021133 -
Sebi313g00030 1405 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 879 911 - -
Sebi313g00030 1405 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 315 1367 IPR045162 GO:0004674|GO:0016236|GO:0045324
Sebi313g00030 1405 Gene3D - 800 982 IPR015943 GO:0005515
Sebi313g00030 1405 FunFam Protein kinase family protein / WD-40 repeat family protein 863 1149 - -
Sebi313g00030 1405 Pfam Protein kinase domain 29 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi313g00030 1405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Sebi313g00030 1405 ProSiteProfiles Trp-Asp (WD) repeats profile. 879 911 IPR001680 GO:0005515
Sebi313g00030 1405 Pfam WD domain, G-beta repeat 875 911 IPR001680 GO:0005515
Sebi313g00030 1405 SUPERFAMILY WD40 repeat-like 876 1368 IPR036322 GO:0005515
Sebi313g00030 1405 SMART serkin_6 27 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi313g00030 1405 Gene3D Transferase(Phosphotransferase) domain 1 21 234 - -
Sebi313g00030 1405 SUPERFAMILY Protein kinase-like (PK-like) 25 218 IPR011009 -
Sebi313g00030 1405 Gene3D - 306 600 IPR011989 -
Sebi313g00030 1405 MobiDBLite consensus disorder prediction 286 306 - -
Sebi313g00030 1405 SUPERFAMILY ARM repeat 315 599 IPR016024 -
Sebi313g00030 1405 ProSiteProfiles Protein kinase domain profile. 27 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi313g00030 1405 FunFam Protein kinase family protein / WD-40 repeat family protein 400 610 - -
Sebi313g00030 1405 Gene3D - 984 1239 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi313g00030 Sebi-Chr313 831157 839609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi313g00030 31 214 AGC Kinase Gene Family AT3G08730 23.280 1.57e-07 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Sebi313g00030 Pkinase 1.2e-10 CL0016