Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi313g00023 ATGATGGAAGACACGGGTAATAGGGTTAATGAGGGTGAAGCTGAAGATGCAAATAATTTGAAGTCCCCTGATGAAGAAAATGCTTGTTCTGTTGAGGATGTTACTGATGTATACAAAAGGATTTCTGAGTTAACTGATGATGACATTAGAATCCTTGAGTTCGATTCTGAACTGGATGGGTATAATTTTTATTCTGAGTATGCTAAATTCAAAGGTTTTGCGGTTAGGAAAGATGATGTTTATCGTGATCGTAATAGGTTAATTACCATGAGGCAATTAGTTTGTAACAGACAGGGGGAAAGGAGTGAGAAGCATTTAAATAGGGCTGACAGAATTAGGAAAGCTAAGGCAATTACTCGTACCAATTGTCTTGCAAGGCTTCGACTGTATTTTGATAAAAACAGTGGGAAGTGGAAGGTTGGAATTTTTGAGCCTGAACACAATCATGAGCTTACTCCTTCAAATATGGTTCATTTGATGCCTGCATATCTTGTTACAAACGGGGATGGTGCAATGCGTGAAGCTATAAGATCTGTGTTTCCAGATTCTATCCACAGGTTGTGTTCATGGCATCTTCACCAGAATGCTTGTGAGAATGTCAAGAATCCCAAATTTTTGGAAGATTTTAAGAAGTTAATTTATGCCAATTATACTCCTGAGAAATTTGAGCAACAGTGGGTACAAGTCATTGAGAAACATGGTCTGAGCAACAATAGGTGGGTGCTGAAGGTGTATGACCTCAAGAGAATGTGGGCTACCGCTTTTTTCAGAGATAACTTTTTTGCTGGTGTCCGGACTACCTCCATTTGTGAAGGTATTAATTCTTTTACCAAGAGATATGTACAGAGTAAAAACAGTCTCGTTGATTTTCTACACAATTTTGAAAGAGCTTTGAATGAATATAGGCACAATGAATTAGCTTCTGATTTTAAATCCTCATACACCCAACCAGTTCTGACAACTGCTTTGGAAAAGTATGAAGTTAATGCGTGTAATTTTTACACCAGGAATAAGTTTTTTGAAATTAGAAAGCAAATTGAGAAAGTTGCTGCTTTGAATATGATTGAAAGGACTGAGGTAGGTAATGTTGTCACATTGAAGATGAATAAATTTGGAAGTCCTGATTCTGTATACCTTGTTTTGTTTGATAAGTCTGTTGGTAAGTTTGTATGTGATTGTCAGTTGTTTGAGTCATGTGGTTTACCATGTTCACATATCTTTTGTGCTATGAAGCATGAGCAAATAGAGTCAATTCCTCCTTCACTCATCTGCAAAAGGTGGACTAAGTTTGCTAAGGTTGATTATATTTCTGCAATTTATGTTGATGAGGGTGATACTACAAAGAAGGAAGTGTTGAGGTCCGGTGTTGTGGGTGCTGCTTGTAATAGGCTTAACAAGGCTGCACATAAAGATCCTCATAATTTTGTGAAAAACATTGAGGCCATTCATCAATTAGCAGACCAGATGGAAAGGCAAGATGGGGTTGATGTCAACATTGCTGACATATCAAGGGTTGTCCGTGATCCAACTATTGTTAAAACCAAAGGTGCACCCTGTAAGAGTAAGAAAATCACGAAAAGAAGAAAATGCTCTTATTGTAAGCGTGTTGGGCATACAATCAGGACTTGTTCCAAGTTCTCAACGCGAGATCAGCTGCATACTGTAGAAGAAGAGGAGTCTTCAGTTGAGAGTGATGGAGAATCAAGAGATTTAACGGATACACATAATCATGTGAATACAAACCGTAGTAATGGTGTAAGTCTATCTGCACATGGGAAGAGTACATCAGGACAGGGTCCAGTGATAGGTAAAAAGTCTAATAAGAGGATGAAGCACGATGATGGTGTGAAGTTAACTCAAGAGTCTGTAAATGATGGCCCACAAGTTAGAAATGTTGATAATATGGATTGTTCAAGGTCAATTGAACATGTGAATCAAATGAGTGAACAGAACAGAGGTGTCAATGGTGATTTGAGATTTGTCCATAATGATTTTAGGTTCACAGGAACTTATCAATATCAGCCGTCAATGTTACCACACTTTGGTCATGCACCTTTCAGCAGCAGATTACTGCCAAACTATCCTTATATTCCGGTGCAACAACCTTTCAGTAACACTGGTACATTACACGAAATGAATACATTTGGTTCACATCATGCACGGGAATTTACTGCAGCTTTAATTGAAGTTCAGAGGAAAGCAGGTGTTGGCATCAGTTTCCTCAATCCAAGAGAAAAATGA 2241 0.382 MMEDTGNRVNEGEAEDANNLKSPDEENACSVEDVTDVYKRISELTDDDIRILEFDSELDGYNFYSEYAKFKGFAVRKDDVYRDRNRLITMRQLVCNRQGERSEKHLNRADRIRKAKAITRTNCLARLRLYFDKNSGKWKVGIFEPEHNHELTPSNMVHLMPAYLVTNGDGAMREAIRSVFPDSIHRLCSWHLHQNACENVKNPKFLEDFKKLIYANYTPEKFEQQWVQVIEKHGLSNNRWVLKVYDLKRMWATAFFRDNFFAGVRTTSICEGINSFTKRYVQSKNSLVDFLHNFERALNEYRHNELASDFKSSYTQPVLTTALEKYEVNACNFYTRNKFFEIRKQIEKVAALNMIERTEVGNVVTLKMNKFGSPDSVYLVLFDKSVGKFVCDCQLFESCGLPCSHIFCAMKHEQIESIPPSLICKRWTKFAKVDYISAIYVDEGDTTKKEVLRSGVVGAACNRLNKAAHKDPHNFVKNIEAIHQLADQMERQDGVDVNIADISRVVRDPTIVKTKGAPCKSKKITKRRKCSYCKRVGHTIRTCSKFSTRDQLHTVEEEESSVESDGESRDLTDTHNHVNTNRSNGVSLSAHGKSTSGQGPVIGKKSNKRMKHDDGVKLTQESVNDGPQVRNVDNMDCSRSIEHVNQMSEQNRGVNGDLRFVHNDFRFTGTYQYQPSMLPHFGHAPFSSRLLPNYPYIPVQQPFSNTGTLHEMNTFGSHHAREFTAALIEVQRKAGVGISFLNPREK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi313g00023 746 MobiDBLite consensus disorder prediction 1 26 - -
Sebi313g00023 746 Pfam FAR1 DNA-binding domain 62 152 IPR004330 -
Sebi313g00023 746 SMART 26again6 389 416 IPR006564 GO:0008270
Sebi313g00023 746 ProSiteProfiles Zinc finger SWIM-type profile. 378 414 IPR007527 GO:0008270
Sebi313g00023 746 MobiDBLite consensus disorder prediction 550 576 - -
Sebi313g00023 746 MobiDBLite consensus disorder prediction 549 613 - -
Sebi313g00023 746 PANTHER OS01G0519700 PROTEIN 52 156 - -
Sebi313g00023 746 MobiDBLite consensus disorder prediction 577 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi313g00023 Sebi-Chr313 552986 556077 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi313g00023 Transposase_mut 0.00017 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi313g00023 - - vvo:131629359 448.358