Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi313g00010 ATGCCAGTGAGGCAGATGAAGGAGAGCTCAGAGCAACACCTTGTCATCAAAACCCATCTGCAGAACCCCATGAATCCAGCTAAGAAGGTTACTAGGGCTGTCCAGAATGGTAAAGGTCCACCACCACTGCCACAAGAACCCCATAACCAAACTTCACCTCATGCAAGGACCAGGGGAAGAAGAAGGAGCAAAGTTGGCAGAAAATATGATCAAGGAGATGTTTTGATGACACCCAGTTGCCGACCCTGCACTGTTGTGACAAATTCTGCAAATGGGTCTGTTGAAAATGGCAGCATCTCTGGTGACATAGAAATGGGTTATCCTACTTCAAGCAAGTCTTTGAGCCTTGCTCTTAGGCCAGGATATGGACAAGTTGGAACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAATCATTATGATGTCACTATTACACCTGAAGTGTCTTCCAAAGCAGTAAACAGATCCATCATAGCAGAACTTGTGAGGCTCTATAAAGAGTCTGACCTTGGGATGAGGCTTCCAGCATATGATGGCAGAAGAAATCTGTACACAGCAGGGGCACTTCCCTTTTCATGGAGAGAGTTTAAGATTAAGCTTATAGAGGAAGAGGATGGAGTTAATGGCCCCAAGAGGGAAAGAGAATACAGAGTGGTGATCAAGTTTCTTTCACGGGCTAACTTGCATCACTTGGGGCAGTTTCTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGACACTCCAAATTCTTGACACCGTACTGAGAGAGCTATCATTATCATCTAAGAGGTTTTGCCCCATTGGGAGATCCTTCTTTTCACCTGACATTAAAACACCACAAAGGCTTGGAGAGGGATTGGAGTCTTGGCGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCTCTTAATATTGATATGGCCTCTGCTACATTCATTGAACCTCTTCCAGTAGTGGAATTTGTTGGCCAGCTATTAGGAAAAGATGTGCTGTCAAGGCAATTGTCCGATGCTGATCGTATTAAGATTAAGAAAGCCCTTAGAGGAATTAAAGTTGAAGTAACACACAGAGGGAGTGTTAGAAGAAAATATCGTGTTTCAGGTTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGAGAATTCAACTATGAAGTCAGTGGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTAAATATACCCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAAGCAAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGACAACGTTATACTAAAAGGTTGAATGAGAAGCAAATTACCGCGCTCCTGAAAGTTACTTGCCAGAGACCTCGTGATCGAGAAAATGACATTTTGCGGACCATTCAGCATAATGCTTTTGATCAAGATCCATATGCAAAGGAATTTGGGATTAAAGTCAGTGAAAAGCTAGCTTCTGTGGAAGCTCGAATTCTTCCTGCCCCTTGGCTTAAATATCATGAAAGTGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAACCGATGGGCATGCATAAATTTTTCACGAAGCGTGCAAGATAGTGTTGCTCGCACTTTTTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAACCTGAGCAGGTAGAGAAAGCTTTGAAGCACGTTTACCATGTGTCAACAAACAAAACCAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCTGACAACAATGGTTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACGGAACTTGGTCTAATTTCTCAATGTTGCCTGACAAAGCATGTCTTTAAGATCACTAAGCAGTATTTGGCTAATGTGTCTCTGAAGATCAATGTCAAGATGGGAGGTAGAAATACTGTTCTTGTTGATGCTGTAAGCTGTAGAATACCATTGGTTAGTGACATACCAACTATAATATTTGGAGCAGATGTTACCCATCCTGAAAATGGAGAAGAATCTAGCCCCTCAATAGCAGCTGTAGTAGCATCCCAAGATTGGCCTGAAGTAACGAAATATGCAGGATTAGTTTGTGCTCAAGCTCATAGACAGGAACTTATACAAGATTTGTACAAAACTTGGCATGACCCTGTCCGTGGCTTAGTTAGTGGTGGCATGATCCGAAAAGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTATAAGTGAAGGGCAGTTTTACCAAGTTCTACTATATGAGTTGGATGCAATTCGAAAGGCATGTGCTTCTTTAGAACCAAACTATCAACCTCCAGTAACTTTTATAGTTGTACAAAAAAGACATCATACTCGGTTATTCGCAAACAACCACAGGGACAGGAACACTACAGATAAGAGTGGAAATATATTGCCGGGGACTGTTGTTGATTCCAAAATCTGTCACCCAACAGAGTTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACAAGTCGTCCAGCTCATTATCATGTTCTGTGGGATGAAAACAATTTCACAGCAGATGGGATTCAATCTCTGACAAACAATCTCTGTTATACATATGCCAGGTGTACACGCTCTGTATCTGTTGTTCCTCCAGCATATTATGCACACTTAGCAGCTTTTCGAGCTCGATTCTATATGGAACCAGACCTGCAGGAGAATGACTCCACTGGGGGTGGTAGTGCTCATCATGGTTCCAAGGCAACACGAGCAGCTGGAGACTGTGGTGTCAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTAATGTTCTATTGTTAA 2925 0.4222 MPVRQMKESSEQHLVIKTHLQNPMNPAKKVTRAVQNGKGPPPLPQEPHNQTSPHARTRGRRRSKVGRKYDQGDVLMTPSCRPCTVVTNSANGSVENGSISGDIEMGYPTSSKSLSLALRPGYGQVGTKCIVKANHFFAELPDKDLNHYDVTITPEVSSKAVNRSIIAELVRLYKESDLGMRLPAYDGRRNLYTAGALPFSWREFKIKLIEEEDGVNGPKREREYRVVIKFLSRANLHHLGQFLAGKRADAPQETLQILDTVLRELSLSSKRFCPIGRSFFSPDIKTPQRLGEGLESWRGFYQSIRPTQMGLSLNIDMASATFIEPLPVVEFVGQLLGKDVLSRQLSDADRIKIKKALRGIKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAFDQDPYAKEFGIKVSEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGLVSGGMIRKATGQKPLRIIFYRDGISEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNTTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENDSTGGGSAHHGSKATRAAGDCGVKPLPALKENVKRVMFYC 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi313g00010 974 FunFam Argonaute 10 504 677 - -
Sebi313g00010 974 FunFam Protein argonaute-2 319 445 - -
Sebi313g00010 974 Pfam Piwi domain 615 927 IPR003165 GO:0003676
Sebi313g00010 974 FunFam protein argonaute 10-like 683 974 - -
Sebi313g00010 974 Gene3D - 683 974 IPR036397 GO:0003676
Sebi313g00010 974 Pfam PAZ domain 349 456 IPR003100 GO:0005515
Sebi313g00010 974 Gene3D paz domain 320 444 - -
Sebi313g00010 974 Pfam Argonaute linker 2 domain 466 512 IPR032472 -
Sebi313g00010 974 SMART PAZ_2_a_3 330 462 IPR003100 GO:0005515
Sebi313g00010 974 SMART DUF1785_2 273 325 IPR014811 -
Sebi313g00010 974 SUPERFAMILY PAZ domain 320 479 IPR036085 GO:0005515
Sebi313g00010 974 SMART Piwi_a_2 614 928 IPR003165 GO:0003676
Sebi313g00010 974 MobiDBLite consensus disorder prediction 932 951 - -
Sebi313g00010 974 CDD Piwi_ago-like 484 927 IPR045246 -
Sebi313g00010 974 MobiDBLite consensus disorder prediction 18 68 - -
Sebi313g00010 974 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 106 929 - -
Sebi313g00010 974 Pfam Argonaute linker 1 domain 274 323 IPR014811 -
Sebi313g00010 974 Pfam N-terminal domain of argonaute 128 262 IPR032474 -
Sebi313g00010 974 Gene3D - 504 677 - -
Sebi313g00010 974 ProSiteProfiles Piwi domain profile. 614 928 IPR003165 GO:0003676
Sebi313g00010 974 Pfam Mid domain of argonaute 523 600 IPR032473 -
Sebi313g00010 974 CDD PAZ_argonaute_like 325 439 - -
Sebi313g00010 974 ProSiteProfiles PAZ domain profile. 326 440 IPR003100 GO:0005515
Sebi313g00010 974 SUPERFAMILY Ribonuclease H-like 606 929 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi313g00010 Sebi-Chr313 266408 273659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi313g00010 1 974 Eukaryotic Initiation Factors Gene Family AT5G43810 79.840 0.0 1625