Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi311g00061 ATGGTATACAAAGGCAACGGCCTCGACGACGATGAAGACTCCTCTCTCCCTCCTCTCCTCAAGCGCCTCCCCAAGGATTTCGGCGGCGGAGCGCCACTGGACTACGACGACGATGAAGACAATGATGCCGGCGATTTCGGTACCGTGATTGTGAAGACCGATCGGAGCCGGCAGCGCGATCGGTCTTCTTCTTCGGGCTTTGCTTCACCGGCGGGCTCGACCTGGAAGTCTCGGAGTTCTTCTCAGGCGAGTCCTTTGGACAGTTCGACGATGGAGAGGGCGGTGGCGAGTATGCAGGCGGTGGGGGAGTTTGGACTCGGGAAGCATAGAAAGGGAAGTGGATCCTCGCAGAACGAGGAGGGGAAGCAACAATCGATAACGACCAAGGTTTCGTCGAGTTCGATCCCTGAGAGTGTTACCAGAGAGGACCCTACCACCAAGTACGAATTGCTCAATGAACTTGGGAAGGGGTCCTATGGAGCTGTTTACAAAGCAAGGGATTTAAGAACCTCGGAGATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGGTATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAATGTCGTCCGTTATCTTGGAAGTTATCAAGGAGAGGAGTATCTTTGGATAGTGATGGAATACTGCGGTGGTGGTAGTGTTGCTGATCTGATGAACGTGACTGATGAACCACTGGATGAAGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAATATTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCGGAAGTCATTCAGGAAAGTCGCTATGATGGGAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCCGAGGGTGTTCCTCCAAGATCGTCAGTGCATCCTATGAGGGTTTTATTCATGATATCCATTGAACCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAGTGCCTGACCAAAGAACCTCGTCTCCGCCCTCCTGCAGCTGAGATGTTGAAGCACAAATTCTTTGAAAAATGGAAAACCGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCAATGGCTTTGCAGGCACAAACTCTTCCTCCAGGTGCATCAGAAGACCGGCCCATGTTAGATTCAAAGCTAAATGATGAATATGGAGATACTGTTCCATCCAGACCTAATAACATAGGCCTTGAGGGCGCTACTGATCTCTCATCACATGGCACTATGAGGAAGCTGCATAAGGTGGAAGATGTGGACACAAGTGAAGGCAACTTTGGCACTGTAATAGTCCATGGAGATGAATTACATAAGACCACACAGGATGCAGATTCTGCAGTTTCCTTGTCTACGCCCCCCAGTGGCACAGGAGTCAGATTATCTGACCCTAGGGTTGACAGTCTAAAAGTTGGTGATGTGAACAATGCCTCTTTTAGAGGATCTAGTCCTACTACAGATACCATACAATCGTCTTTACCTTATGTTAGTAATTCCACTGAGCTGAACCTCAGAAGAGAAGGTAGCCATCGAACACACACTGGAATTGGTAGTGATATAAGCAATAGCACATTGAAGAGTGAAACAGTCAGCCGCAAAGCATTTGCTTTACAAGATAAGCTATGGTCCATTTATGCTGCTGGTAATACAGTGCCCATACCATTCTTAAGGGCGACAGATATATCACCTATTGCTCTCCTTTCAGACAATGTGCTTGGTGGCATACAACAGGATACCAGTGGAACTGGAACACTAGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGGGTCGGAGAGGACTAAATGAGATGCCGCTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAAGATATGCCACTGCAGGAACTACAAGCAACCCAGGAGCAGCGGACTATTCAAAATCTCTCTGATACACTTCGTACAATTCTTCGGTTGTAG 2205 0.4644 MVYKGNGLDDDEDSSLPPLLKRLPKDFGGGAPLDYDDDEDNDAGDFGTVIVKTDRSRQRDRSSSSGFASPAGSTWKSRSSSQASPLDSSTMERAVASMQAVGEFGLGKHRKGSGSSQNEEGKQQSITTKVSSSSIPESVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPPAAEMLKHKFFEKWKTGSAAMLPKLEKARQIRASMALQAQTLPPGASEDRPMLDSKLNDEYGDTVPSRPNNIGLEGATDLSSHGTMRKLHKVEDVDTSEGNFGTVIVHGDELHKTTQDADSAVSLSTPPSGTGVRLSDPRVDSLKVGDVNNASFRGSSPTTDTIQSSLPYVSNSTELNLRREGSHRTHTGIGSDISNSTLKSETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGIQQDTSGTGTLEALQELFSGDGQSKKGRRGLNEMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi311g00061 734 ProSitePatterns Protein kinases ATP-binding region signature. 154 177 IPR017441 GO:0005524
Sebi311g00061 734 SMART serkin_6 148 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi311g00061 734 MobiDBLite consensus disorder prediction 509 524 - -
Sebi311g00061 734 MobiDBLite consensus disorder prediction 106 146 - -
Sebi311g00061 734 MobiDBLite consensus disorder prediction 117 141 - -
Sebi311g00061 734 Gene3D Transferase(Phosphotransferase) domain 1 144 433 - -
Sebi311g00061 734 SUPERFAMILY Protein kinase-like (PK-like) 145 403 IPR011009 -
Sebi311g00061 734 ProSiteProfiles Protein kinase domain profile. 148 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi311g00061 734 Pfam Protein kinase domain 148 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi311g00061 734 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 130 441 - -
Sebi311g00061 734 MobiDBLite consensus disorder prediction 62 92 - -
Sebi311g00061 734 CDD STKc_MAP4K3_like 147 402 - -
Sebi311g00061 734 MobiDBLite consensus disorder prediction 507 530 - -
Sebi311g00061 734 MobiDBLite consensus disorder prediction 1 19 - -
Sebi311g00061 734 MobiDBLite consensus disorder prediction 1 92 - -
Sebi311g00061 734 FunFam Aurora kinase A 140 229 - -
Sebi311g00061 734 FunFam serine/threonine-protein kinase dst1 isoform X1 145 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi311g00061 Sebi-Chr311 995757 1008488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi311g00061 16 734 MAP Kinase Kinase Kinase Kinase AT1G69220 61.558 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Sebi311g00061 Pkinase 3.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi311g00061 - - gmx:100804995 1157.51