Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi311g00031 ATGATGCAGACAGTTGTGAATGCTGTCAGATGTTCTATATACATTTTTTTCTTAAACTTCTCTCTCTTACACCTACAACTGATTGCGGTGCCTGTGGCTGATAAGGCCAATTATGTTCCCTCAGAGAACATAGTTCTCAACTGTGGCTCTAACACAACTGAGCTTGTACAATATGATGGTAGGAACTGGACTGGTGACATTGCTTCACCATATGTTCCCTCTAATGCAGACATCAACTCCCTAATAGCCACAGCCCCTCCAACACTTCAATCCATTCCTCAAGTTCCCTATATGACTGCTCGCATCTTTCACTCTCAATTCACCTACAGATTCAATGTAACCCCAGGTCCTAAATTCATACGCCTTCACTTCTACCCAGCTTCCTACTTGGATCTCAATATCTCCAAAGCTTTCTTATCAGTCACTGCTGGTAACATCACTCTTCTCCATAACTTCAGTGTTTCCCTCAACGCTGATTACTTCAACTCAGCATATTTCATGAAGGAATTCATTGTCCATGTAAGTGGGAGCACCTTAGAACTCACTTTCACCCCATCATCCAATGCTTCTGATGCTTATGCATTTGTGAATGGGATTGAAGTTATTTCAATGCCCCTTGGTTTATACATTCGCGGTGATGATGCCCCTCTTCCTTTAGTTGGCCACTATCCCACATTGGTGTACATTTATAATGATTCCGCCATGGAAAACTTATACAGATTGAATGTAGGAGGTGAGCAAATTCAACCCAAATATGATAAGGCCATGTTTCGCACTTGGGACACTGATGATCGTTACTTATTAGGGGCTAATCTAGATTTTCAACCGTTTAATATGAGCATGCAAGTTGTGTATAAAGGTAATGTTCCAGCGAATTCTGCACCTGAAGACGTCTACCGCACATCCCGTTCAATGGTTAGCTTTGAAAAGGGCCTTGTCAATTTAAATTACAACCTAACGTGGTTTTTTCCTGTTGATTCTGGCTTCAATTATCTAGTTAGGCTTCACATCTGTGAAATTGATTATGATATAACAAAGGTCAATGAGGTAGTTTTTTCTGTATTTTTAAATAATCAAACAGCTGAAGAGCAGTTTGATCCAATTGCCGCAAGTGGGGGGTCTGGAGTCGCTGTATACCGAGACTATGTCGTGATGGCTCCAGAGGATAATGAGGGAAAGCAAGATCTGTGGCTAGAACTGCACCCAAACAAAAAAACTAAACCTAAGTACTACAATGCTTTCTTGAATGGTTTAGAGATTTTTAAACTGAGTTCTGTTGATAAGAATCTTGCAGGGCTTAACCCAGCCAAAAGGAAGCTGGAATCTTATGTAAAGCCTCCCTCTGCACAGATTAAAAATTCAAAGAAACTCACATTCATCCTCATTGGATGTGGACTTGGTGCAGTGGTGGCACTACCAATTCTCCTGTGCTTAGTTCTATACAGGTTGAAGGTGATTAGGCCTGCAAGGATCATGTCATGCTGCGGTCTCATTGTCCTTCCACCCAATCAGGCAAACAAGTCATCATTTGGCAGTCATTTTTCATTGAGAAAGATAAAAGTGGCAACAAATGACTTTGATGAGACTCTAATCATAGGCACAGGAGGATTTGGAAGTGTTTACAAGGGTAGCTTTGATGGTGGGGAAACTTTTATAGCCATAAAACGTGCCAATCCAATGTCAGAACAAGGTGTTATAGAATTTGAGACAGAGGTCCATCTGCTCTCACAGCTCCGGCACAACAACCTAGTCTCACTTTTAGGTTCTTGCAATGAAGATGGGGAGATGATACTGGTCTATGACTTCATGGCCAATGGAACTCTGCCTGCTGTACTTCCAGATGAAGATGATGAGCATGTAAACTTGGCTGAATGGGCTGTGTTTTGCTTTGAGAATGACAATGTAGAGCAAATGGTGGACCCCAACTTAGAAGGAAACATAGTTAAGGAGTGCTTTGAGTTATATTTAAAAGTTGCAATGAAATGTTTGGCAGAAAAAGGGGTGGAGAGGCCATCCATTGGTGATGTGCTCCAGAACCTTGTTCTGGCATTGCAACTTCAGAAAAATCCTGGTACTTCCCGAGATGGAAATGTACATAGGAATGATAACACTGGTTTGCAGGGCTATTCAGATTTGACACCTGGGGTCGAGTTCTCTGAAATCATGATGCCTGTTGGCCGGTGA 2184 0.4185 MMQTVVNAVRCSIYIFFLNFSLLHLQLIAVPVADKANYVPSENIVLNCGSNTTELVQYDGRNWTGDIASPYVPSNADINSLIATAPPTLQSIPQVPYMTARIFHSQFTYRFNVTPGPKFIRLHFYPASYLDLNISKAFLSVTAGNITLLHNFSVSLNADYFNSAYFMKEFIVHVSGSTLELTFTPSSNASDAYAFVNGIEVISMPLGLYIRGDDAPLPLVGHYPTLVYIYNDSAMENLYRLNVGGEQIQPKYDKAMFRTWDTDDRYLLGANLDFQPFNMSMQVVYKGNVPANSAPEDVYRTSRSMVSFEKGLVNLNYNLTWFFPVDSGFNYLVRLHICEIDYDITKVNEVVFSVFLNNQTAEEQFDPIAASGGSGVAVYRDYVVMAPEDNEGKQDLWLELHPNKKTKPKYYNAFLNGLEIFKLSSVDKNLAGLNPAKRKLESYVKPPSAQIKNSKKLTFILIGCGLGAVVALPILLCLVLYRLKVIRPARIMSCCGLIVLPPNQANKSSFGSHFSLRKIKVATNDFDETLIIGTGGFGSVYKGSFDGGETFIAIKRANPMSEQGVIEFETEVHLLSQLRHNNLVSLLGSCNEDGEMILVYDFMANGTLPAVLPDEDDEHVNLAEWAVFCFENDNVEQMVDPNLEGNIVKECFELYLKVAMKCLAEKGVERPSIGDVLQNLVLALQLQKNPGTSRDGNVHRNDNTGLQGYSDLTPGVEFSEIMMPVGR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi311g00031 727 FunFam receptor-like protein kinase FERONIA 500 602 - -
Sebi311g00031 727 Pfam Protein tyrosine and serine/threonine kinase 531 630 IPR001245 GO:0004672|GO:0006468
Sebi311g00031 727 Gene3D Phosphorylase Kinase; domain 1 512 599 - -
Sebi311g00031 727 Gene3D - 233 424 - -
Sebi311g00031 727 Gene3D - 43 205 - -
Sebi311g00031 727 FunFam FERONIA receptor-like kinase 43 205 - -
Sebi311g00031 727 Pfam Malectin-like domain 46 422 IPR024788 -
Sebi311g00031 727 Gene3D Transferase(Phosphotransferase) domain 1 600 697 - -
Sebi311g00031 727 FunFam FERONIA receptor-like kinase 233 424 - -
Sebi311g00031 727 PANTHER OS03G0124300 PROTEIN-RELATED 15 480 IPR046957 GO:0004672
Sebi311g00031 727 ProSiteProfiles Protein kinase domain profile. 526 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi311g00031 727 ProSitePatterns Protein kinases ATP-binding region signature. 532 555 IPR017441 GO:0005524
Sebi311g00031 727 SUPERFAMILY Protein kinase-like (PK-like) 516 683 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi311g00031 Sebi-Chr311 522920 525451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi311g00031 602 727 Receptor kinase-like Gene Family AT3G51550 35.928 1.54e-21 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi311g00031 Malectin_like 6.2e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi311g00031 - - gmx:100776859 889.412