Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi311g00030 ATGACTTCATCTACACTCTCAGTCTCAAACACAGCCCGTCTTGCACCAAAAGTCCCTTACTCAACAGCAAGAATAATTCAGTCTCCATTCACTTACTCATTCCCCTTCTCCCCTGGCCTTAAATTCATTCGTATTTACTTCCTCTCATCTTCATATTTGAAGATGAACCCTTCCAAGGCTTATTTTTCTGTCAAAGCCGGTCCTTACACACTTGTCAGTAATTTCAATCCATCCATTGCTGCAAAAGAGCTCAACTTGGTGTATATCACTAAGGATTTCTTAGTCAATGTCCAGGAAGAGAAACTCAACATTACTTTCAGTCCATCTCCTCTAATTTCCAATGCATTTGCTTTTGTAAATGGCATTGAAGTCTTCTCAGTGCCACACAGTATATACTTTCAAGGTTCTAAGGTTCCTGTTCCTTACCTTGGACACCAAGAACCATTGTTTATTAATGATGAATATGCTCTTGAGATGCTTTACCGGGTTGGTATAGGTAATGATGCACAGAGTGTTGAGGTCGAAAATGCCTTTGGGTCATGGTTGGATGATAAGAGCTACATATCTGGTTCACAATATGGAAGTGTCCTTAATATAAAGGGCCGTCCAGTTTCCATAAATCACACCACTTTCACATCAGATGATTATAATTATTCAGCACCAGAACAACTATATTGGACTGCCAGGACAATGGGTAGCAATGAAGATGCCAACACAAGATACAATTTAACATGGTCATTCCCTGTTGACTCTGGATTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATCTCCTTAGAGGTAACACAGGTCAATCAGAGGGTGTTCAAGGTGTACATAAACAATCAAACAGCAGAGGAGAGTATGGACATTGTTGCTTTGGCTGGTGCTCCATATACTCCTTTATATAGAGACTATGTTGTTATGGTTCCTATGGAAAGTGAGAGAAGGCAAGATATGTGGATAGCACTTCACCCCAACTTGGAGTCAAAACCAAAATATGCTGATGCCATATTGAATGGCGTTGAGATCATCAAGTTAAGTGATAGCAGTTATAATCTTGCAGCAAGTTTCCAACTTGAAAAGGAACAAAAGGAGAAGAAAGTTCCACGAGTCATTGTTGTGGCTGCTACTTTAGGTGCCATTTTGGGGATGTTCATTACAATTTTCATTCTTATCCGCAGAGCATGGAAAAAAACAAAGAGGGAAACTTCTCAGGTACTCCAATTTAATTCTACTTCAACAAGTCACAAAAAAGTTCAAGTAACAGTGGACTCAGGTCAATGCTATCAATTCACATTAGCAGAGATCAGCATTGCTACTAGCAACTTCAGTGAAGCTCTTGTCATTGGGGAGGGAGGCTTTGGAAAGGTGTACAAAGGCATCTTGGCTGATGCTGATGAAGCTACTCATGTGGCAATAAAACGCTCTAAGCCTAGTTCTCGCCAAGGATTTAAGGAGTTTCAAAATGAGATCAATTTTTTCTCATTTAGTCACATGAATCTAGTGTCATTGCTGGGCTACTGCCAGGAGGGCAATGAACTGATACTTGTCTATGAATACATGGCTCAGGGCCCTCTTTGTGATCATTTATACAAGAAACAAAAACAGCCACTGCCATGGAATCTAAGACTAAAGATTTGTGTTGGTGCAGCTCGAGGACTCCATTACCTCCATACAGGCACAAGGCATCCAATGATTCACCGTGATATCAAGTCAGCCAACATATTATTGGATCAGAATTGGGTACCCAAGATTGCAGATTTTGGGTTATCTAAAATAGTTCCTTCAATTTGCCACACCCATGTTAGCACTGAGGTTAAGGGTACTTTTGGATATCTAGACCCTGAGTACTATAAGCGAAGAAAACTGACTGAAAAATCTGATGTGTATTCATTTGGAGTAGTTTTGTTTGAAGTGTTATGTGGGAGACCAGCTGTGAATCATGTGGCAGTGGAAGAGGAAAATGAGAAAGTTGGCTTGGTCGATTGGGCCATGCATTGTCACCAATCAGGAAGTGTTGACAGATTAATTGACCCACATTTAGAAGGACAGATAAGGTCAGAATGCCTAATGGCGTTTGTGGACATTGGCATTCAGTGCTTGACTAACAAGAGTGCAGAAAGGCCAACCATGGGAGAGGTGTTAAGTAATTTGGAGAAGATCCTTTCCTGGCAGGAGAGTTTAGAGGAACAAGACATCAATACAAGTTAA 2214 0.4065 MTSSTLSVSNTARLAPKVPYSTARIIQSPFTYSFPFSPGLKFIRIYFLSSSYLKMNPSKAYFSVKAGPYTLVSNFNPSIAAKELNLVYITKDFLVNVQEEKLNITFSPSPLISNAFAFVNGIEVFSVPHSIYFQGSKVPVPYLGHQEPLFINDEYALEMLYRVGIGNDAQSVEVENAFGSWLDDKSYISGSQYGSVLNIKGRPVSINHTTFTSDDYNYSAPEQLYWTARTMGSNEDANTRYNLTWSFPVDSGFKYLVRLHFCEISLEVTQVNQRVFKVYINNQTAEESMDIVALAGAPYTPLYRDYVVMVPMESERRQDMWIALHPNLESKPKYADAILNGVEIIKLSDSSYNLAASFQLEKEQKEKKVPRVIVVAATLGAILGMFITIFILIRRAWKKTKRETSQVLQFNSTSTSHKKVQVTVDSGQCYQFTLAEISIATSNFSEALVIGEGGFGKVYKGILADADEATHVAIKRSKPSSRQGFKEFQNEINFFSFSHMNLVSLLGYCQEGNELILVYEYMAQGPLCDHLYKKQKQPLPWNLRLKICVGAARGLHYLHTGTRHPMIHRDIKSANILLDQNWVPKIADFGLSKIVPSICHTHVSTEVKGTFGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLCGRPAVNHVAVEEENEKVGLVDWAMHCHQSGSVDRLIDPHLEGQIRSECLMAFVDIGIQCLTNKSAERPTMGEVLSNLEKILSWQESLEEQDINTS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi311g00030 737 PANTHER OS07G0166700 PROTEIN 428 726 IPR045272 GO:0004714|GO:0006468
Sebi311g00030 737 SUPERFAMILY Protein kinase-like (PK-like) 419 720 IPR011009 -
Sebi311g00030 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Sebi311g00030 737 FunFam FERONIA receptor-like kinase 1 128 - -
Sebi311g00030 737 Gene3D Transferase(Phosphotransferase) domain 1 522 736 - -
Sebi311g00030 737 Gene3D Phosphorylase Kinase; domain 1 404 521 - -
Sebi311g00030 737 Pfam Protein tyrosine and serine/threonine kinase 449 719 IPR001245 GO:0004672|GO:0006468
Sebi311g00030 737 FunFam receptor-like protein kinase FERONIA 405 521 - -
Sebi311g00030 737 ProSiteProfiles Protein kinase domain profile. 444 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi311g00030 737 SMART serkin_6 444 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi311g00030 737 ProSitePatterns Protein kinases ATP-binding region signature. 450 475 IPR017441 GO:0005524
Sebi311g00030 737 Pfam Malectin-like domain 16 346 IPR024788 -
Sebi311g00030 737 CDD STKc_IRAK 450 722 - -
Sebi311g00030 737 FunFam Receptor-like protein kinase FERONIA 522 737 - -
Sebi311g00030 737 Gene3D - 155 348 - -
Sebi311g00030 737 Gene3D - 1 127 - -
Sebi311g00030 737 FunFam FERONIA receptor-like kinase 155 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi311g00030 Sebi-Chr311 520097 522310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi311g00030 16 732 Receptor kinase-like Gene Family AT3G51550 46.205 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi311g00030 Malectin_like 1.5e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi311g00030 - - gmx:100776324 1100.12