Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi310g00016 ATGATTGGAGGAGAGAATAACACATGTGATAGGAGAGACTCTTACTCTATTGAGCCAAGCTCACGGCCTTTCGTTCGCCGGAGTTTGGACCTACTGCCCTTGAAATACATAACAGACATGGCGATCCCTCCGCCGGAGAATAGCCGGAAGCGGGCAGAAGCTGAATCTGTGTGTATCTCCGGCGCCGGCACGGGAGTGCGAGAACGCGAGTTTCCAAAGTATAGGGTCACATCGGTTTGTGGAAGGAGGAGGGATATGGAAGATGCTGTTTCGGTGTGTCCTTCGTTCTGCAAAGAAAGAGGTTTAGAAAATCAAAACGAGATTCATTTCTTCGGTGTTTACAACGGTCATGGATGCTCACATGTGGCGACTATGTGCAAAGAGAGTCTGCATGAGATTGTGAAGGAAGAGATAGGACGAGACAAAAAGTGTTTTGGAGTGGAAATCCACGATGGAGCAGAGTTTCGCTTGAATGGACGAGGAGGTACTAAGCTGGAGCCAGAGCAACCAGACCTCAACTTGCAGCCTGACCGACCCGATGAGTTGGCTCGGATCCAAGACGCGGGTGGGCACGTGATCTATTGGGATGGTCCAAGAGTGCTTGGAGTGTTGGCCATGTCCAGAGCCATAGGGGACAATTATCTGAAGCCGTATGTTATTTTGGAACCGGAGGGTGACGAGAAGCTACCGTCGCCGCCGGGGTCTCCGTCGAGTGACGTGGGTGGTCGATGGCTCCGACAAGGCGTGCTTCAACGCTTCCGGTTTGCTGACGAAGTTGGCGTTAGCGAGGCACAATTCGGACAATGTGAGCGTCGTGGTGGTAGATTTGAGGAGAGGTCAACGTCAACCACCACAACAACAATGGAGATTAATTAA 876 0.5148 MIGGENNTCDRRDSYSIEPSSRPFVRRSLDLLPLKYITDMAIPPPENSRKRAEAESVCISGAGTGVREREFPKYRVTSVCGRRRDMEDAVSVCPSFCKERGLENQNEIHFFGVYNGHGCSHVATMCKESLHEIVKEEIGRDKKCFGVEIHDGAEFRLNGRGGTKLEPEQPDLNLQPDRPDELARIQDAGGHVIYWDGPRVLGVLAMSRAIGDNYLKPYVILEPEGDEKLPSPPGSPSSDVGGRWLRQGVLQRFRFADEVGVSEAQFGQCERRGGRFEERSTSTTTTTMEIN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi310g00016 291 ProSiteProfiles PPM-type phosphatase domain profile. 73 291 IPR001932 -
Sebi310g00016 291 Pfam Protein phosphatase 2C 176 224 IPR001932 -
Sebi310g00016 291 Pfam Protein phosphatase 2C 74 139 IPR001932 -
Sebi310g00016 291 SMART PP2C_4 59 290 IPR001932 -
Sebi310g00016 291 SUPERFAMILY PP2C-like 72 226 IPR036457 -
Sebi310g00016 291 CDD PP2Cc 76 224 IPR001932 -
Sebi310g00016 291 Gene3D - 66 155 IPR036457 -
Sebi310g00016 291 MobiDBLite consensus disorder prediction 272 291 - -
Sebi310g00016 291 Gene3D - 156 228 IPR036457 -
Sebi310g00016 291 PANTHER PROTEIN PHOSPHATASE 173 224 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi310g00016 Sebi-Chr310 464165 467051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi310g00016 57 224 PP2C-type Phosphatase Gene Family AT1G07430 42.922 3.14e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi310g00016 K14497 - gmx:100807302 203.371