Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi310g00010 ATGACGGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGCAAGTGATTGTGTTTTTGCTCCTTACTTCTCCTATGACCAGGCTGCAACTCATTTTGCAGCAGTGCATAAGGTTTATGGTGCTAGTAATGTCTCCAGGCTATTGTCACATCTTCCAATTCAGAACAGAAGTGATGCTGCCATCACTATATCTTATGAAGCCTTGGCTCGCATGCACGATCCTATATATGGTTGTGTTGCTCATATCTATGCATTACAGCAACAGGTTGCCAGCTTGCAAGAGGAGATAGATGTTCTTGGAAGTCTAATGGCAAATTCCACAGTTAGTGCTGTTAACTGTGGCAGTGTACAAGCACCAATGAACTCAAACAATGGAATACAACATCTTTTGCAGCATGATGATGCTACAAGGACTCAATATTATCAAAATCAACTGGCTAATTTTCTTTCACAAGAAGGAAGTGCCACAGTCTACCAAAGTTTTGACTCACAGATGGATGTAGAGCTTCCTAATGCATATGGACTTGAAGAGACTTTATTTGGGGATTCCAACTCCAACCCTTTAGAGAAGTTCCTATCTGGAATTGACCAAGATGTTTTCATGAACCACCCTTGGTTCAAGCATAATGCAGACATAAGGAACTAG 660 0.4167 MTGFGSSCGACKFLRRKCASDCVFAPYFSYDQAATHFAAVHKVYGASNVSRLLSHLPIQNRSDAAITISYEALARMHDPIYGCVAHIYALQQQVASLQEEIDVLGSLMANSTVSAVNCGSVQAPMNSNNGIQHLLQHDDATRTQYYQNQLANFLSQEGSATVYQSFDSQMDVELPNAYGLEETLFGDSNSNPLEKFLSGIDQDVFMNHPWFKHNADIRN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi310g00010 219 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Sebi310g00010 219 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Sebi310g00010 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi310g00010 Sebi-Chr310 310861 311921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi310g00010 1 117 AS2 family AT5G06080 70.940 3.73e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi310g00010 LOB 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi310g00010 K13945 - gmx:100787638 322.398