Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi310g00007 ATGTCCCTAATTGCCATATTTATTGCTCTGCTTCATGCCCAACCCCATTATGGCGAAGGCACTCACACTTCTCCATGTTCTCCTTCTTGCCTCAATCCCTGTAAACTCTACTCAGGAAGAGTGGTTTTTTTTGGGTTCCATGGAGCCAGCAACATAAGCATAAACGGCGATGCAGTGATTGAGGACAATGGCATACTTACCCTTACAAACGACACTGAAAAAGTTGTTGGGCACGCGTTTTATTCAAACCCAATCCACTTCAAGAACAACTCCACTGACGGCAAAGTTTTCTCCTTTTCCACAGCTTTTGCTTTTGCAATAACCACCAAGCTTCCAAAACAAGGTGGCCATGGCTTAGCCTTCACCATTTCTCCCTCTAAAGAGCTTAAAGGTGCTTATCCAAGCCAATACTTGGGCCTTCTCAACCTACACGATGTGGGGAAATTCTCTAACCACTTGTTTGCAGTGGAGTTTGACACTGTTCAAGACTATGCATTTGATGACATCAATGGCAACCACGTTGGTATCAACCTGAACAACATAAAATCTAACAGATCTGTTACCGTTGCTGATGGATCAACCAAGCAACACCTCAATTTGCAGAGTGGCAAGGTGATTCAAGCATGGGTGGATTACAATTCCTCTAGCAACCAATTGGATGTTAGGCTTTCCACAACCTCTTCAAAACCCAGGGTGCTAGCGAGCTTGCACTATATCCTGGGTTGGAGCTTCAAGATGAATGGGGAAGCAAAATCTCTGAACTTGGAAACATTACCATCACTCCCTGGGTCTAAGAACATCAAAAAGGCCTTAATACTTGGAATCACTGTTTCTATTTCTATTCTAACCATAATCTTGGCTATTGGGTTAACAACTTACCTAATAAGAAAGATGAAGAAAGGTGATGATATTGAAGCTTGGGAGCATAATATTGGTCCCCACAGGTTCCCCTATGAGGAGCTGAAACAAGCAACAAAAGGTTTCAAGGAGAAAGAACTAATTGGGTTTGGTGGGTTTGGTCGAGTTTACAAAGGGATTCTACCAAACACCAACACCCAAGTCGCAGTGAAGCGAATCTCCCAGGACTCAAAACAAGGGATGCAACAATTCATGTCAGAGATTGCAACCATTGGTAGGCTCCGTCACAGGAACCTAGTTCAATTACTAGGTTGGTGCCGGAAACGCTATGATCTACTACTTGTGTACGTTTTCATGCCCAATGGAAGCTTGGACAAGTACCTATTCGACCAACCCAGAGCAATTTTAAGCTGGGAACAGAGGTTCAAGATCATAAAGGGCGTAGCTTTGGGTCTGGTTTACTTGCATGAGGAATGGGAACAAACGGTGATTCACAGGGACATAAAAGCAGGGAACGTTTTGTTGGATTCAGAGATGAATGGAAGGTTAGGTGACTTTGGTTTGGCGAAGCTTTACGAGCATGGGGCGAACCCAAACACCACGTGTGTTGTGGGAACATTGGGGTACTTAGCACCAGAGTTAACTCGAACGGGGAAACCAACTACTAGTTCTGATGTGTTTGCATTGGTGCTCTGTTGCTTGAAGTGGCGTGTGGGAGAAGACCCGTTGAGCCTAAAGCGTTGCCTGAGGAACTCATATTGGTGGATTGGGTTCGGGATATGTGGCGGGTCGGTGCTGTTTGGAGGTTATGGACCTCAAATTGGGTGGGGTGTTTGA 1695 0.4496 MSLIAIFIALLHAQPHYGEGTHTSPCSPSCLNPCKLYSGRVVFFGFHGASNISINGDAVIEDNGILTLTNDTEKVVGHAFYSNPIHFKNNSTDGKVFSFSTAFAFAITTKLPKQGGHGLAFTISPSKELKGAYPSQYLGLLNLHDVGKFSNHLFAVEFDTVQDYAFDDINGNHVGINLNNIKSNRSVTVADGSTKQHLNLQSGKVIQAWVDYNSSSNQLDVRLSTTSSKPRVLASLHYILGWSFKMNGEAKSLNLETLPSLPGSKNIKKALILGITVSISILTIILAIGLTTYLIRKMKKGDDIEAWEHNIGPHRFPYEELKQATKGFKEKELIGFGGFGRVYKGILPNTNTQVAVKRISQDSKQGMQQFMSEIATIGRLRHRNLVQLLGWCRKRYDLLLVYVFMPNGSLDKYLFDQPRAILSWEQRFKIIKGVALGLVYLHEEWEQTVIHRDIKAGNVLLDSEMNGRLGDFGLAKLYEHGANPNTTCVVGTLGYLAPELTRTGKPTTSSDVFALVLCCLKWRVGEDPLSLKRCLRNSYWWIGFGICGGSVLFGGYGPQIGWGV 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi310g00007 564 PANTHER - 55 529 - -
Sebi310g00007 564 Gene3D Transferase(Phosphotransferase) domain 1 405 540 - -
Sebi310g00007 564 FunFam L-type lectin-domain containing receptor kinase IX.1 313 404 - -
Sebi310g00007 564 FunFam Lectin-domain containing receptor kinase A4.3 405 539 - -
Sebi310g00007 564 SUPERFAMILY Protein kinase-like (PK-like) 305 529 IPR011009 -
Sebi310g00007 564 Pfam Protein kinase domain 328 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi310g00007 564 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Sebi310g00007 564 CDD lectin_legume_LecRK_Arcelin_ConA 42 248 IPR001220 GO:0030246
Sebi310g00007 564 SMART serkin_6 328 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi310g00007 564 ProSiteProfiles Protein kinase domain profile. 328 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi310g00007 564 Pfam Legume lectin domain 43 230 IPR001220 GO:0030246
Sebi310g00007 564 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 262 IPR013320 -
Sebi310g00007 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Sebi310g00007 564 Gene3D Phosphorylase Kinase; domain 1 313 404 - -
Sebi310g00007 564 Gene3D - 42 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi310g00007 Sebi-Chr310 201783 203557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi310g00007 43 529 Receptor kinase-like Gene Family AT3G55550 55.449 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi310g00007 Pkinase 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi310g00007 - - zju:107413402 678.707