Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi30g00060 ATGGCTGCTTTGTTGAAGAGTCTCTCAAGATCGCCCCTTTCAAATGCATTCGCTAAGGGCTTCGTTTTCCAATCTAAATCTTCTCACTATCACAGATACACTATCCGCCCACCCGTCTTCGCAATCGCTGTCATTTCCGGTGGAATCACCTACTTTAGCTACCATTCCTCACCCAACCCGGCTCATGCAGAACACGTGAATGGAGAGAAAAGTAGAGATATCGCACTCAATCCTGATAAATGGATCGAATTTAAGTTGCAAGACACTGCCAGGGTCAGTCACAATGCCCAGTTATTCAGGTTTTCATTTGATCCCACTAAGAATTTGGGTTTAGATGTTGCATCTTGCATTATTACGAGGGCACCATTGGGACAAGATGCTGAAGGAAAACCAAAATATGTGATACGTCCGTACACTCCTATATCAGATCCAGAATCTAAGGGTTACTTTGATTTGTTAATCAAGGTGTATCCTGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAGCCTGGTGATGTTATTGAAGTAAAAGGGCCCATTGAAAAGCTCAGATATACTCCTAATATGAAGAAACATATTGGCATGATTGCTGGTGGCACAGGAATTACTCCAATGCTTCAGGTAATTGAAGCTATACTGAAGAATCCTGATGACAAAACTCAGATATCATTGCTTTACGCTAATGTCTCCCCAGATGACATACTGCTTAAACAGAAGCTTGACATTCTTGCAGCTAGCCATCCAAACTTAAAGATATTTTACATTGTAGATAATCCAACGAAAAGTTGGAGAGGAGGTGCAGGTTACATATCAGAGGATATGGTTGTGAAAGGCTTACCCAGTCCTAGTGACGATACTCTTGTGCTTGTTTGTGGCCCCCCTGGGATGATGGAACATATATCTGGGGACAAGGCTAAAGACCGGTCACAAGGAGAGCTTACTGGCTTACTCAAAGAGCTTGGGTACACTGAGCAAATGGTTTACAAATTTTAG 996 0.4227 MAALLKSLSRSPLSNAFAKGFVFQSKSSHYHRYTIRPPVFAIAVISGGITYFSYHSSPNPAHAEHVNGEKSRDIALNPDKWIEFKLQDTARVSHNAQLFRFSFDPTKNLGLDVASCIITRAPLGQDAEGKPKYVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVIEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDKTQISLLYANVSPDDILLKQKLDILAASHPNLKIFYIVDNPTKSWRGGAGYISEDMVVKGLPSPSDDTLVLVCGPPGMMEHISGDKAKDRSQGELTGLLKELGYTEQMVYKF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi30g00060 331 Pfam Oxidoreductase FAD-binding domain 84 186 IPR008333 -
Sebi30g00060 331 Gene3D - 178 331 IPR039261 -
Sebi30g00060 331 CDD cyt_b5_reduct_like 84 331 - -
Sebi30g00060 331 PANTHER NADH-CYTOCHROME B5 REDUCTASE 53 331 IPR001834 GO:0016491
Sebi30g00060 331 SUPERFAMILY Riboflavin synthase domain-like 73 189 IPR017938 -
Sebi30g00060 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 195 214 IPR001709 GO:0016491
Sebi30g00060 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 288 296 IPR001709 GO:0016491
Sebi30g00060 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 233 244 IPR001709 GO:0016491
Sebi30g00060 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 136 143 IPR001709 GO:0016491
Sebi30g00060 331 FunFam NADH-cytochrome b5 reductase 74 177 - -
Sebi30g00060 331 Gene3D Translation factors 74 177 - -
Sebi30g00060 331 PRINTS Cytochrome B5 reductase signature 288 296 - -
Sebi30g00060 331 PRINTS Cytochrome B5 reductase signature 136 143 - -
Sebi30g00060 331 PRINTS Cytochrome B5 reductase signature 172 186 - -
Sebi30g00060 331 PRINTS Cytochrome B5 reductase signature 233 244 - -
Sebi30g00060 331 PRINTS Cytochrome B5 reductase signature 195 214 - -
Sebi30g00060 331 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 173 329 IPR039261 -
Sebi30g00060 331 FunFam NADH-cytochrome b5 reductase 178 331 - -
Sebi30g00060 331 Pfam Oxidoreductase NAD-binding domain 196 302 IPR001433 GO:0016491
Sebi30g00060 331 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 79 187 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi30g00060 Sebi-Chr30 2827120 2835058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi30g00060 66 331 NADPH P450 reductases AT5G17770 40.299 3.28e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi30g00060 K00326 - cave:132165401 527.324