Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi30g00034 ATGTTTGAGCAAACTCTCTCTCTCTACAAATGCAGCCATGTTACGAGGCCTCAACACATTCTCATGGCTCCTCCATGGGTTCAAGAGCTCCATCTCCGTCACTTGAGTATTCCTGTGACTATTGATAAAATGTTTTCAGTTACCCCATCGAGGCCAATTCCCGTTAAACCAGGTGACAGCTTATACCTTTCGAACCTCGATGACATGATTGGAGCACGTGTATTCACACCAACAGTGTACTTTTATCAACCAGACAACATGAGTTCTTGCCAAAAGCCTGTGACTAAAACACTACGCGGTGCTCTCGCAGATGTTTTAGTGCCTTACTATCCTCTTTCTGGCAGGCTTAGAGAGACCAAGAATGGTAAGCTTGAAGTGTTTTTTGGACCAGAACAAGGAGCACTCATGGTTGAGGCACGATCTAATATTGCCTTATCTGAACTAGGAGACCTCACAGCTCCAAACCCAGCTTGGGGACCTTTGATCTTCAAATTTCCCAATGAAGAACAATACAAAGTCCTTGAAATGCCATTGGTCATTGCTCAGGTTACCCTATTCAGCTGTGGTGGCTTTAGCCTTGGTTTGAGGCTCTGCCATTGCATCTGTGATGGCCTAGGAGCTATGCAGTTCCTAGGTGCATGGGCTGCAACAGCAAAAACAGGGAAGCTAGTCACAGACCCTGAGCCCTGTTGGGACAGGGAAATGTTTAGGCCTCGTGATCCACCAGTGGTGAAATTTCCACACATGGAGTTCATGAGAATTGATGAGGGCTCTAACCTGACAATGACACTATGGCAAACAAAGCCTGTTCAAAAGTGTTACAGGATCAAGCGTGAGTTCCAAAACTGCTTGAAATCCCTTGCTCAGCCGATTGATGCTGCAGGTTGCACCACTTTTGATGCCATGGCAGCTCATATTTGGAGATCATGGGTGAAAGCCCTTGATGTAAGACCATTAGATTACCAGCTTAGGCTAACATTTTCAGTCAATGCTCGGCAGAAGCTTAGAAACCCACCACTGAAAGAAGGGTTTTATGGCAATGTGGTATGTGTTGCATGCACAACAAGCACTGTTTCAGAGCTTGTACATGGACAGCTCCCAGAGACTACCCGTTTGGTTCGTGAAGCCAGACAGTGTGTCTCAGAAGAGTATTTGAGATCCACAGTGGATTATGTTGAAGTGGATAGGCCAAGGCAACTTGAGTTTGGAGGTAAACTAACAATAACTCAATGGACCAGATTCTCAATATACAAGTGTGCAGATTTGGGTGGGGTAGGCCTCTCTATGCTGGCCCTATAG 1299 0.4588 MFEQTLSLYKCSHVTRPQHILMAPPWVQELHLRHLSIPVTIDKMFSVTPSRPIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQPDNMSSCQKPVTKTLRGALADVLVPYYPLSGRLRETKNGKLEVFFGPEQGALMVEARSNIALSELGDLTAPNPAWGPLIFKFPNEEQYKVLEMPLVIAQVTLFSCGGFSLGLRLCHCICDGLGAMQFLGAWAATAKTGKLVTDPEPCWDREMFRPRDPPVVKFPHMEFMRIDEGSNLTMTLWQTKPVQKCYRIKREFQNCLKSLAQPIDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARQKLRNPPLKEGFYGNVVCVACTTSTVSELVHGQLPETTRLVREARQCVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADLGGVGLSMLAL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi30g00034 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 47 423 - -
Sebi30g00034 432 Pfam Transferase family 38 418 - -
Sebi30g00034 432 Gene3D - 259 429 IPR023213 -
Sebi30g00034 432 Gene3D - 36 253 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi30g00034 Sebi-Chr30 1827174 1828472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi30g00034 51 423 Monolignol Biosynthesis Gene Families AT5G48930 30.469 1.60e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi30g00034 K15400 - gmx:100802814 741.88