Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi30g00010 ATGGAGATGGTGGAGATGGTTTCATCCGCCTCCGACGGTGGTTCCAAGACGAGGGACATCGACGGCCTTCTCGCCGGCGTCGGCTACAAAGTCCGTTCATCGGAGCTGAATCAAGTGGCTCAAAACATCGAACGGTTGGAGAACGCGATGGTGAACTCATCTGCTGACATTTCTGAACTCGCTTCGGAAACGGTTCACTACGATCCGTCTGATATAGGGACGTGGGTGGATACTCTTCTCTCTGGGCTCGACCACACCGTAACGTTACCCTGCGATCTCTCTGAGCTATCCAGTACTGCACTTCCGCCACAACAACACCAATTAATAACCACCGTGGAAGAAGACTCAGGGATAAGGCTCGTCCATATGTTGATGACGTGTGCAGATTCTCTGCAACGTGGCGATCTACCACTGGCTGGCTCGTTAATCGAGGCCATGCAGGGCTTGTTAGCACAGGTGAACACCAACTGCGGAATCGGAAAAGTCGCCGGTTACTTCATCGACGCTCTAAGCCGCCGTATCTTCGGCCAAAACACCGCAATCGTGAGTTCTCCTTACGAGAACGATGTTCTCTACCATCACTACTACGAGGCTTGTCCTTATCTCAAGTTCGCTCACTTCACAGCGAACCAAGCCATCCTTGAAGCCTTCAGCGGTCAAGATTGCGTCCACGTCATCGATTTCAACCTCATGCAGGGTCTTCAATGGCCGGCGCTAATTCAGGCTCTGGCTCTCCGTCCTGGAGGTCCGCCGTTGCTCCGCCTCACCGGCATTGGCCCTCCGTCACCGGACGACCGCGACACGCTCCGTGAAATCGGAGTTCGGCTCGCTGAGTTGGCTCGCTCCGTCAACGTCCGGTTCGCTTTCCGCGGCGTGGCGGCGGCGCGGCTGGAGGATGTGAAGCCGTGGATGCTTCAGGTGAGCCCGAAGGAAGCTGTGGCCGTGAATTCCATCATGCAGCTTCACCGTCTCCTCGGTTCTAAATCCGGCTCGAACAAATCAGGAATCGAAGCGGTACTTGGCTGGATCCGGGGTTTGAATCCTAAGATCGTGACGGTTGTGGAGCAGGAAGCGAACCATAACGAGGAACGGTTCATGGAGCGGTTCACGGAGGCGCTGCATTATTACTCGACCGTTTTTGACTCGCTTGAAGCGTGTCCGATCGAACCGGAAAAGGCACTGGCGGAGATGTACTTGCAAAGGGAGATATGTAACGTGGTGTGCTGTGAGGGAACGGCTCGGGTGGAGAGGCATGAACCGCTGGCTAAGTGGAGGGATCGGCTCGGGAAAGCCGGGTTCAGACCGCTGCATTTGGGTTCAAATGCGTTCAAGCAAGCCAGCATGCTTTTGACACTGTTTTCAGCTGAGGGTTACTGTGTGGAAGAGAATCAAGGATGCTTGACTCTTGGTTGGCATAGCCGTCCTCTCATTGCAGCTTCGGCTTGGCAAGCCGTGCCTGTGCGAGAGAGGGAAACGCTGCGTTTCGAGCACTGA 1494 0.5522 MEMVEMVSSASDGGSKTRDIDGLLAGVGYKVRSSELNQVAQNIERLENAMVNSSADISELASETVHYDPSDIGTWVDTLLSGLDHTVTLPCDLSELSSTALPPQQHQLITTVEEDSGIRLVHMLMTCADSLQRGDLPLAGSLIEAMQGLLAQVNTNCGIGKVAGYFIDALSRRIFGQNTAIVSSPYENDVLYHHYYEACPYLKFAHFTANQAILEAFSGQDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSPDDRDTLREIGVRLAELARSVNVRFAFRGVAAARLEDVKPWMLQVSPKEAVAVNSIMQLHRLLGSKSGSNKSGIEAVLGWIRGLNPKIVTVVEQEANHNEERFMERFTEALHYYSTVFDSLEACPIEPEKALAEMYLQREICNVVCCEGTARVERHEPLAKWRDRLGKAGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENQGCLTLGWHSRPLIAASAWQAVPVRERETLRFEH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi30g00010 497 Pfam Transcriptional regulator DELLA protein N terminal 21 86 IPR021914 -
Sebi30g00010 497 Pfam GRAS domain family 120 483 IPR005202 -
Sebi30g00010 497 ProSiteProfiles GRAS family profile. 111 483 IPR005202 -
Sebi30g00010 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 100 479 IPR005202 -
Sebi30g00010 497 Coils Coil 29 63 - -
Sebi30g00010 497 Gene3D - 19 83 IPR038088 -
Sebi30g00010 497 SMART DELLA_2 21 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi30g00010 Sebi-Chr30 543595 545088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi30g00010 6 483 GRAS Transcription Factor Family AT1G14920 47.909 2.98e-165 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi30g00010 GRAS 5.4e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi30g00010 K14494 - gmx:100805968 748.429