Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi309g00071 ATGGAGCCACCGGAGAGCCTGCCGTTGGAAGCGGCGGAGAAGATCATCCTCCGGTGGGACTCCACCGCTTCGGAGGAAGCTCGTGAGAAGATGATATTCGACGGTGACCGTGAAGAGGTGGATCTCTACCTCCAAGCCGTTGATGAAATCCAACGGTCCATGTCCTCTGCTTCTCTCTCCGATGAACAGAGCAAGGTTTATGGCAGCGTTAGGAAATCCGCTGTGGATGCAAGTTTTCGGAGGCTTGGTGTTGAGAAGTTAAGCATCGGTGATGTTCAGAGGTTGGAGTGGGAACAGCTTGAGGCCAAGATCAGGCGTTGGATAAGAGCTGCTAAGGTCTGTGTTAGGACCTTGTTTGCTAGTGAGAAGAGGCTCTGTGAGCAAATCTTTGATGGGGTTGGAACTGCTATTGATGATGCTTGTTTCATGGAGACTGTGAAGGGACCTGCTATTCAGCTTTTCAACTTTGCTGAAGCCATCAGCATAAGCAGAAGGTCACCTGAGAAGCTGTTCAAGATTCTAGACCTGCATGATGCTTTGATGGATTTGATACCTGATATTGATATTGTGTTTGACTCTAAGTCCTCTGAGTCAATTCGTGTTCAAGCTGCTGAGATTCTTTCAAGGTTGGCTGAGGCTGCAAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGCTTAGGGAACCTTCTAAGGTTCCTGTCCCTGGTGGGACAATTCACCCTTTGACAAGGTATGTGATGAATTATATAAGTTTGATCTCTGATTACAAGCAGACTATGAATGAGCTTATAGTGTCTAAGCCATCAACTGGGTCTAGATATTCTGGTGATCCTTCAACCCCGGATATGGATTTTACTGAGTTGGAAGGGAAGACCCCTTTGGCTATTCACTTGATTTGGATTATTGTTATATTGCAATTTAACTTGGATGGTAAGTCCAAGCATTATAAAGATGCATCCTTGTGTCACTTGTTCATAATGAACAATGTGCACTACATTGTTCAGAAGGTTAGAGGGTCTCCTGAATTGAGGGAGATGATTGGAGATGATTATTTGAAGAAGCTGACAGGGAAATTCAGGCAAGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAAGGGTTGCATGTGAGTGGTGGCTTTTCTTCTGGGGTCTCAAAGAGTGCTTTGAGAGAAAGGTTTAAGGCCTTCAATGCTATGTTTGAAGAGGTTCATAGGACTCAAGCTGTATGGTTGATACCAGATTCACAACTCAGGGAGGAGCTTCGGATATCTATATCAGAGAAGCTGATCCCAGCATATAGGTCATTCCTAGGGAGGTTCAGGAGTCACATAGAGAGTGGAAGGCATCCAGAGAACTACATTAAGTATTCTGCTGAAGACCTGGAGGATGCTGTTTTGGATTTTTTTGAAGGAATTCCTGTTTCTCAACACTTGAGGAGGAGATCTCAATGA 1479 0.451 MEPPESLPLEAAEKIILRWDSTASEEAREKMIFDGDREEVDLYLQAVDEIQRSMSSASLSDEQSKVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKRLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDIVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTMNELIVSKPSTGSRYSGDPSTPDMDFTELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDASLCHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSAEDLEDAVLDFFEGIPVSQHLRRRSQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi309g00071 492 Gene3D Exocyst complex component Exo70 14 488 - -
Sebi309g00071 492 Pfam Exo70 exocyst complex subunit 106 474 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi309g00071 492 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 480 IPR004140 GO:0000145|GO:0006887
Sebi309g00071 492 SUPERFAMILY Cullin repeat-like 28 479 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi309g00071 Sebi-Chr309 1018192 1020069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi309g00071 9 84 EXO70 exocyst subunit family AT1G72470 47.368 5.24e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi309g00071 K07195 - qsa:O6P43_018425 793.497