Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi309g00060 ATGTCATTTAGATCAACTGCACTGTATTTGGCTTGGACCTTCAACACCGTTGAGGAAGATGCAAGAGCTTATGATGCTGAAGCTAGGAGGATCCATGGCAAGAAAGCCAAGGTGAACTTCCCTGATGGGGCTGCTGGTTCTTCCTCCAAACATGTCAAGGCCAATCCACAGAAGGAAAATGCATGTTAA 189 0.4603 MSFRSTALYLAWTFNTVEEDARAYDAEARRIHGKKAKVNFPDGAAGSSSKHVKANPQKENAC 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi309g00060 62 PANTHER DNA-BINDING DOMAIN 13 49 IPR044808 GO:0003700|GO:0009873
Sebi309g00060 62 MobiDBLite consensus disorder prediction 38 62 - -
Sebi309g00060 62 Gene3D AP2/ERF domain 3 42 IPR036955 GO:0003700|GO:0006355
Sebi309g00060 62 SUPERFAMILY DNA-binding domain 13 42 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi309g00060 Sebi-Chr309 789190 789378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi309g00060 13 59 AP2-EREBP Transcription Factor Family AT1G72360 55.319 4.02e-10 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi309g00060 K09286 - zju:107435298 68.9366