Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi309g00056 ATGGATGGAGCTATTGAGATAAATCAAGGCAACAACATTTTGTCTTTAGAGTTACAGCAGGCACTTGAAGCCCCATTTGATTTAAATGAAGCCCCATTTGATTTAAATGAGTTGCCATTAGAAGAAGAAAATCTTTCTAATGGTTTGGATACAATATTTGAACCATTAGAAGAGGAAAATCCTTCCAATGCTTCGAATATAATATTTGAACCATTTGTTGGTCAATGTTTCTCAAACGAGGAAAAAGCTTTGGAATTTTATCAGAGATATGCTAAGCAACATGGATTTTCAGTTCTAAAGGCTCGCTTTGATAAAAACAAAAATGGAGAAGTTAGAAGGCGTGATTTCTTTTGTCATCGCGCAGGAAGGCAACCACTCAAAATTGTTTACCCATCAAAGGATCAACGACATCGATCATCGGCACGCTCTGACTTCAAGGCTCATATGCGTATTAAACTTAAAAAATATGTTGATATATTCCCTGATGAATGGCATGTTGTTGAGTTTATTGCCGAACATAACCATGAGTTGCTTTCTGAAGAAGAGGAGCGCTTTCTACGATCTCACCGCACCATTACTAAAGAAGATGAAAATCGTATACTTTTGTTGAAAGATGCGGGTCTTTGTGTGCCACAAATTATGCGTGTGATGGAGTTAGAAAAAAATGTGAAACATGGATATCTTTCTTTTATCCCAAAGGATGTTTACAATCTGTTTACTAAGATCCATAACATTGAAGGGAAGAATGGTGTTACTGATTTGTTGTGCTACTGTCAAGCGGCAAAGGCAGAGAATTTGGGTGAGTCTAAGGTGGATTGGGTAAAGAAACCATGTATGATACATTGGGGGGAGAGCGTTGTGTTTAGCAGCGGCGCTGCAACATGCAGAACGCAACGACGGCCACTTAACGGCATCACAATGACCTGGCAGTGTAGTGACGAGAGGGAGGGGACGATGGACCACGTCACGCAACTAGGAGAGGCACATCGCCAATCCGCCCTTCTTGGTGAGGTAAGAGACGAAGATGACCTTTTGAGACTAGTCAATTACGGTGAGTGCATGGTCGCCGAGGAGGAAATATTACACAACTCGATGCAACCGGTAACTATAGCCTTCCACAAGGGGAGAAGAAAAGGGGTTGATCTAGCCATTGAAGATATTGAACATAAGCAATTGCATGCGACCATGTTGGATAAATATAGGGGATCTTCACTACGAACTCTATCTCCATTGGAACATCAAGCTCAAGATATCTTGACTCCTTTTGCATTCAAAAAGTTTCAAGAAGAATTCAGTAGAGCTACTCAATATTTTGTGTTTCTTGATGGAACTACTGATTTTATGGTGCAATATTACAAGGAAGGTGAGACTCAAAAGCATAAAGTTCATTGGGATAAACAAGTAGCAACTTGTTCATGGCCATTGCTTGTAGATGAGGAAAACGGTGAAGATAATAATGAAATAGAGATGATTGATCTTTTGCAATGTCCTCCAAAGTCAAAGACCAAAGGGCGTCCAAAGCAAAAAAGTTTAAGGGGTGGAAAAGAATTAAGCATCAACAAACAAGTGAAGAAATGTAGATTATGCAAACATCCTGGTCATAACTTCACTACTTGTCCTGATAAGGAGAATATGGATGGAGTTTCTAACTCTGAAGGAGGACCAACCATGACTCTGTCTTTGTCTTCAACCCTACCTTGTCTGTGTCGTCCTTCAAAGCTCAGCCACTGGTATGTACCGGAAAAAAAAAGCTTAGCCATCGGTGACGCCTTCTGCCGCTCACTCATTGGAACATCCGAACATGTACTCGTTGGTCATTCTGGTTCATTCATCTTCCGCTCACTCGCCGGTGATGCTGGGTCTAGTATAGCTGCCCAGCTACAAGTTTGA 1890 0.4101 MDGAIEINQGNNILSLELQQALEAPFDLNEAPFDLNELPLEEENLSNGLDTIFEPLEEENPSNASNIIFEPFVGQCFSNEEKALEFYQRYAKQHGFSVLKARFDKNKNGEVRRRDFFCHRAGRQPLKIVYPSKDQRHRSSARSDFKAHMRIKLKKYVDIFPDEWHVVEFIAEHNHELLSEEEERFLRSHRTITKEDENRILLLKDAGLCVPQIMRVMELEKNVKHGYLSFIPKDVYNLFTKIHNIEGKNGVTDLLCYCQAAKAENLGESKVDWVKKPCMIHWGESVVFSSGAATCRTQRRPLNGITMTWQCSDEREGTMDHVTQLGEAHRQSALLGEVRDEDDLLRLVNYGECMVAEEEILHNSMQPVTIAFHKGRRKGVDLAIEDIEHKQLHATMLDKYRGSSLRTLSPLEHQAQDILTPFAFKKFQEEFSRATQYFVFLDGTTDFMVQYYKEGETQKHKVHWDKQVATCSWPLLVDEENGEDNNEIEMIDLLQCPPKSKTKGRPKQKSLRGGKELSINKQVKKCRLCKHPGHNFTTCPDKENMDGVSNSEGGPTMTLSLSSTLPCLCRPSKLSHWYVPEKKSLAIGDAFCRSLIGTSEHVLVGHSGSFIFRSLAGDAGSSIAAQLQV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi309g00056 629 Pfam FAR1 DNA-binding domain 85 178 IPR004330 -
Sebi309g00056 629 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 44 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi309g00056 Sebi-Chr309 754373 758805 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi309g00056 FAR1 1.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi309g00056 - - ecad:122597415 253.447