Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi309g00039 ATGATGAGTGCAAATGCAAGAAATAGGTCCCCTTTCACAGCAACTCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTCAAATACATGGTTACAGGAACCCCTATTCCACCAGATCTCATCTACTCTATCAAAAGAAGCCTAGACACTTCAATGTCTTCAAGGCTCTTCCCACATCACCCAATTGGGTGGGGATGTTTTGAAATGGGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCATCAACAAGCACCGCCACAAACACCTCCCAAACAAACCCAACCTCTTATAACAGAAACCTTTCCTTGACCAACCCCAACATAACTCCACCCTCTTCTTTCCCTTTCTCTCCACTGCCCTGTGACTCCCAACCCTTTTCCCAATCTTACCAAAACTCTTCTCTAAATCCCTTCTTTTACTCCCAATCAACCTCTTCTAGACCCCCTGATTCTGATTTTCCACCTCAAGATGCCACTACCCACCAGCTATTTATGGACTCTGGGTCTTATTCTCAGGAAGACAAGGATTATAGGCATGTTCATGGAATAAGGGAGGGTGTGGATGAGAGAGCTTTCTTCCCTGAAGCTTCAGGGTCTTCTAGGAGCTATCCTGACTCATATCAGCAGCTATCAATGAGCTCTTACAAGCCCTATTTAAACTCCCATTTTCAGGACATCAATGATAATCCAAGACAGCAAGAGCAGCACTGCTTTGTTTTGGGTACTGATTTCAAATCAACAAGACCAAGCAAAGAGAAAGAAACTGAAACAACTCAAAAATCCCTTCACCACTTCTTTGGGGAGTGGCCACCAAAGAACACAGATTCCTGGCTAGATCTTGCTTCCAATTCCAGAATCCCAACCGGTGATGATCCTCCTTCCCTTTCATATTAG 1017 0.4444 MMSANARNRSPFTATQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSMSSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSSTSTATNTSQTNPTSYNRNLSLTNPNITPPSSFPFSPLPCDSQPFSQSYQNSSLNPFFYSQSTSSRPPDSDFPPQDATTHQLFMDSGSYSQEDKDYRHVHGIREGVDERAFFPEASGSSRSYPDSYQQLSMSSYKPYLNSHFQDINDNPRQQEQHCFVLGTDFKSTRPSKEKETETTQKSLHHFFGEWPPKNTDSWLDLASNSRIPTGDDPPSLSY 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi309g00039 338 PANTHER GROWTH-REGULATING FACTOR 5 10 319 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sebi309g00039 338 MobiDBLite consensus disorder prediction 117 151 - -
Sebi309g00039 338 MobiDBLite consensus disorder prediction 317 338 - -
Sebi309g00039 338 Pfam WRC 77 119 IPR014977 -
Sebi309g00039 338 MobiDBLite consensus disorder prediction 160 202 - -
Sebi309g00039 338 MobiDBLite consensus disorder prediction 103 202 - -
Sebi309g00039 338 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi309g00039 338 MobiDBLite consensus disorder prediction 285 338 - -
Sebi309g00039 338 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Sebi309g00039 338 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi309g00039 338 MobiDBLite consensus disorder prediction 287 302 - -
Sebi309g00039 338 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi309g00039 Sebi-Chr309 590941 592188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi309g00039 3 309 GRF Transcription Factor Family AT3G13960 41.304 1.22e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sebi309g00039 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi309g00039 - - aprc:113851425 580.096