Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi309g00036 ATGGGAAGAAGTCCTTGTTGTTCTAAGGAAGGCTTAAACAAAGGAGCATGGACAGCTACTGAAGACAAGATTCTCACAGAATACATTAAGATTCATGGCGAAGGAAAATGGAGACACCTTCCCAAAAGAGCAGGACGAACAGACAATGAAATAAAGAATTACTGGAACACCAACATTGGAAGGAAGCTTCAAAATGGAACCATTAATATTGCAAGTGGTGCACGGAACTCATCACTTCAACAAGAACAACGAAACATGAAACAAAGTACACAAGATCAGTGGCACTATACACAAAACAATAAGGGTTCTTCTTGTTATGTGGTCCAGACAAAAGCAACAAGGTGGAGTGCTAAGGCCACAATCATCACTCAACAAAATGAAGGGGTAGAGAGCAATGTCCACCTTGATAACAAAATGAACAAGGGAGGATCACCACCATTGTCTTCACCTTCAGACAATAACAACAATGTCAATGTCAATGTTGACCCTTTGGATTTCATGGCAGATTTTGAGATGGATGGCAATTTCTTTTCGGAGCTTCTCAAGATGGATATACCTAATTCAGAACCATCTTGTTTGGAAAATAAGATACACAAGATAGAAGATCATAATGGTGGTAACCCTAGCACACTTGACAAGGGCCGTTTATCTCCAAAATCATCCAATGATACTCCCAGCTGCCCCTTCCTTTGGGCTGATTCATTTTCCTATGATACAGGTTTTGATTTTCAACCAATGGCAACTTTTGTCGAGTCCGGATTTGATTGGATTTGA 774 0.4018 MGRSPCCSKEGLNKGAWTATEDKILTEYIKIHGEGKWRHLPKRAGRTDNEIKNYWNTNIGRKLQNGTINIASGARNSSLQQEQRNMKQSTQDQWHYTQNNKGSSCYVVQTKATRWSAKATIITQQNEGVESNVHLDNKMNKGGSPPLSSPSDNNNNVNVNVDPLDFMADFEMDGNFFSELLKMDIPNSEPSCLENKIHKIEDHNGGNPSTLDKGRLSPKSSNDTPSCPFLWADSFSYDTGFDFQPMATFVESGFDWI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi309g00036 257 Pfam Myb-like DNA-binding domain 14 57 IPR001005 -
Sebi309g00036 257 SMART sant 13 61 IPR001005 -
Sebi309g00036 257 SUPERFAMILY Homeodomain-like 8 66 IPR009057 -
Sebi309g00036 257 Gene3D - 11 64 - -
Sebi309g00036 257 ProSiteProfiles Myb-like domain profile. 9 59 IPR001005 -
Sebi309g00036 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 63 IPR017930 -
Sebi309g00036 257 MobiDBLite consensus disorder prediction 199 222 - -
Sebi309g00036 257 CDD SANT 16 59 IPR001005 -
Sebi309g00036 257 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi309g00036 Sebi-Chr309 532914 534333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi309g00036 1 72 MYB Transcription Factor Family AT2G16720 39.200 1.20e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi309g00036 Myb_DNA-binding 4.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi309g00036 K09422 - gmx:100809225 194.126