Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi309g00026 ATGAGCAAATTGCAATATCTGGACATTTATAATAAAGGGTCTTGTATCTTGGATAAAGGTGGCTTGAATCTTACTCAAGGGCTTGAATATTTGCCAAATGAGCTCACATTTCTTCGTTGGGTGCATTATCCATTGGAATCCTTGCCGTCCAAGTTTTCTGGGGAAAAGCTTGTTGTACTGAACTTGCAGTATAGCAGAGTGAAGAAACTTTGGCATAAAGTGCCGGATCTTGTGAATTTAAAGATTCTTATACTCAGTTTATCCTCACAATTGGTGGAGTTTCCAGACTTGTCAAAGGCCACAAATCTTGCAGTAATAGATCTTCGTCTCTGTGTAAGATTGACAAGTGTGCATCCCTCTGTTTTTTCTCTCAACAAGCTCAACAAATTGGATCTAGGTGGATGCATTTCCCTTACAAGCCTTCCAAGCAATATCCATTTAAGCTCCCTTCGTTACCTCTCCCTAGCTGGTTGCCTTTCACTAAAGGAATTCTCAGTGACCTCAAAGAATATGAAGAAATTGAATCTACAACTCACAGGCATCAAAGAATTGCCCTCATCATTTGGACTTCAAAGCAAACTTGAGAAGCTACTTCTTGCATACACTTACATTCAGCACTTGCCTGAAAGCATCAAGCATCTTTCAAAGCTGCGACATTTAGATTTAAGGCATTGCAGGGAGCTTAGGAGTCTACCAGAGCTTCCATCATCACTACAAACACTAGATGCTAGTGGATGTGTATCACTTGAGACCATAACCTTCCCTTCAACTTTAACAGAACAACTGAAGGAAAACAAGAAAAGGGTTGCATTCTGGAATTGCCTGAAATTGGATCAACATTCTCTCAAGGCTATTGGGCTGAATGCACAAATTAACATGATGAAGTTTGCATACCATCATATATCCACATTTGGGCCCAATTATGGCACCTATGTGTATCCAGGAAGCAGTGTTCCAAATTGGTTGGTGTATAGAACAACAGAAAATTACATAACTGTTGATCTATCTTTTGTTGCACATTCCTCTGAACAGTTGGGCTTCATTTTTTGCTTCATTGTTCCAAAAGTCACATCAGAGGGTTTGATTTTGATATTTAACATCAATGCTGGTGAAGGGGAAGGTAATGGAATTAATGTGTACTTAGATAGGCCAAGTCGTGGGATTAAATCAGATCATGTGTATCTAATGTATGACAAGGGATGTTCTCACTACCTAATTAGCAGAGCCAAACATCAACCAAAGTTTAAAATTAAGGTTACAGCGGTTTCTGGAACACTGACATCACACAAATGGAATTGGCTGATGATCGTGCTCCGAGTATCACAATCTCATTATTGA 1338 0.3939 MSKLQYLDIYNKGSCILDKGGLNLTQGLEYLPNELTFLRWVHYPLESLPSKFSGEKLVVLNLQYSRVKKLWHKVPDLVNLKILILSLSSQLVEFPDLSKATNLAVIDLRLCVRLTSVHPSVFSLNKLNKLDLGGCISLTSLPSNIHLSSLRYLSLAGCLSLKEFSVTSKNMKKLNLQLTGIKELPSSFGLQSKLEKLLLAYTYIQHLPESIKHLSKLRHLDLRHCRELRSLPELPSSLQTLDASGCVSLETITFPSTLTEQLKENKKRVAFWNCLKLDQHSLKAIGLNAQINMMKFAYHHISTFGPNYGTYVYPGSSVPNWLVYRTTENYITVDLSFVAHSSEQLGFIFCFIVPKVTSEGLILIFNINAGEGEGNGINVYLDRPSRGIKSDHVYLMYDKGCSHYLISRAKHQPKFKIKVTAVSGTLTSHKWNWLMIVLRVSQSHY 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi309g00026 445 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 168 258 - -
Sebi309g00026 445 Gene3D Ribonuclease Inhibitor 165 337 IPR032675 -
Sebi309g00026 445 Gene3D Ribonuclease Inhibitor 1 164 IPR032675 -
Sebi309g00026 445 SUPERFAMILY L domain-like 4 269 - -
Sebi309g00026 445 Pfam Leucine rich repeat 170 226 IPR001611 GO:0005515
Sebi309g00026 445 Pfam C-JID domain 313 406 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi309g00026 Sebi-Chr309 403909 405430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi309g00026 1 257 WRKY Transcription Factor Family AT4G12020 39.925 2.62e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi309g00026 - - gmx:100802823 606.675