Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi308g00062 ATGGGAAGTAATTCCGTGCGTGTGAAAGAAGCACTTGTGGTCACTCCTTCCGAACCCACCCCATCCCTTGTCCTACCTCTATCAGCGCTTGATTCGCAACTCTTCCTTCGTTTCACCATAGAGTACCTCTTCGTCTACGAGCCTAGCCCCGGCGTGGACCAGGGTTCCACCACGGCTCGTCTTAAAGCAGCATTAGCCAAAGCCCTGGTTCCTTATTACCCTTTCGCTGGGAGGGTAAGAACCAGACCCGATGGTTCGTTCCTTGAGGTGGTGTGTGGGGCCCAGGGTGCGGTGTTTATCGAGGCTTTCACTGACCGTTACAGTTCCAACGACTTTGAGAAACCGCCCAAAACGGTTACACACCGGAGGAAATTCTTATCCCTCCACGTGGCAGACGTTCTCAAGGGATCGCCTGTGCTGGTTGTTCAGCTGACGTGGCTCGCCGACGGAGCCGCTGCAATCGGCGTTGGGATCAACCACTGCATCTGCGACGGAATCGGGAGCGCTGAGTTTCTAAACTATTTCGCCGAGTTAGCTTCCGGAAAACTCAGCGAGTTGGATTCTAGAGAATCTAGACCTAGACCTGAACCGGTTTGGGACCGTCACCTAATGAACTCGAAGCGTGTTCGGGTTAACCCGGTGAGTCACCCCGAGTTCAACCGAGTCCCTGACCTCTGCGGGTTCATGAACCGGGTCACCAGCGGGCTTAAACCAACCTCCATTACCTTCGACAAGAGGCGACTCAGCGAGTTGAAGAGACTCGCTCGGTGCACGAGTCAACCAGGCGAGTCGTTGTTCTACACGTCGTTCGAGGTGCTCGCGGCTCATGTATGGAGGAGCTGGGCAAGAGCACTGGATTTTCCGCCGAATCAAATGTTGAAGCTGTTGTTCAGCGTCAACGTGCGGAATAGGGTTAAACCGGGTTTACCCGAGGGGTATTACGGGAACGCGTTTGTGTTGGGTTGCGCGGAGACGAGTGCGAAGGAGTTGGAGGAGAGGGGGATCGGGTACGGGTCGGGTTTGGTGAAGAAAGCGAAGGAGAGAGTGGGGAACGAGCACGTGAGGGAGGTGATTGAGTTGGTGTCGGAGCGGAGCGCGAGTCCTGACTCAGTGGGAGTGTTGATAGTGTCACAGTGGTCAAGATTGGGTTTGGAGAGGGTTGACGTGGGAATGGGAAAGCCGGTTCATGTGGGACCCGTATGCTGCGATCGGTACTGTTTATTTTTGCCGGTGAGGCAGGAGAATGTGAGTGCGAGTGTGAAGGTGATGGTTGCTGTCCCTACACCTGCCGTTGACAATTACGAGATTTTGATGCGAGCGTTGCATCTGTGA 1332 0.548 MGSNSVRVKEALVVTPSEPTPSLVLPLSALDSQLFLRFTIEYLFVYEPSPGVDQGSTTARLKAALAKALVPYYPFAGRVRTRPDGSFLEVVCGAQGAVFIEAFTDRYSSNDFEKPPKTVTHRRKFLSLHVADVLKGSPVLVVQLTWLADGAAAIGVGINHCICDGIGSAEFLNYFAELASGKLSELDSRESRPRPEPVWDRHLMNSKRVRVNPVSHPEFNRVPDLCGFMNRVTSGLKPTSITFDKRRLSELKRLARCTSQPGESLFYTSFEVLAAHVWRSWARALDFPPNQMLKLLFSVNVRNRVKPGLPEGYYGNAFVLGCAETSAKELEERGIGYGSGLVKKAKERVGNEHVREVIELVSERSASPDSVGVLIVSQWSRLGLERVDVGMGKPVHVGPVCCDRYCLFLPVRQENVSASVKVMVAVPTPAVDNYEILMRALHL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi308g00062 443 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 427 - -
Sebi308g00062 443 Gene3D - 232 438 IPR023213 -
Sebi308g00062 443 Pfam Transferase family 5 428 - -
Sebi308g00062 443 Gene3D - 2 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi308g00062 Sebi-Chr308 1002124 1003455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi308g00062 6 422 Monolignol Biosynthesis Gene Families AT5G48930 26.932 1.30e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi308g00062 - - gmx:100817048 686.411