Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi308g00061 ATGAAGGGTTATGAACCCCGGTCAAGCTCTTCTTGTGCAGCCTGCAAGTTCTTGAAAAGAAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTTCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATTGAAGTGCCAGAGGAGCAGAGGGAGGACACTGTGAATTCACTGGCTTATGAGGCTGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATAGGTGCCATAGCACTGTTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGATCGTCTTGCTCGTTATGCTGCTGCTGCTACCACCCCTTCAAGTTCAACTGATATCTCGAGTTCCAATGTTAGCTTGCCACCCTTCCCTGATTTCTTCACCTGCAGTGATTTCAATGACAGCTTCTGCCACAGCTCTTCATCTCAGTCATTGAGCAGACATGAAACGGTGGATGATTTCATTCAAATCCCATATATATTTTGA 528 0.4583 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSSSTDISSSNVSLPPFPDFFTCSDFNDSFCHSSSSQSLSRHETVDDFIQIPYIF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi308g00061 175 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Sebi308g00061 175 Coils Coil 90 117 - -
Sebi308g00061 175 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Sebi308g00061 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi308g00061 Sebi-Chr308 957903 958430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi308g00061 1 141 AS2 family AT3G11090 65.972 2.64e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi308g00061 LOB 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi308g00061 - - gmx:100305534 262.692