Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi308g00018 ATGGACAACATTCATGACTCAACACCCAAATCAAAACTTGCCCCTATGACCAACACCACCGCCCCTCTCCTCCCACCGGACTCCGAGCACTCCCCGGAAGATCCGATTCCGCAAAATGGGTCCATTTCCGGAGCGGTGTTCAACGTATCAACCACCATGATCGGTGCCGGAATCATGTCGGTTCCGGCAACAATGAAGGTGCTGGGCATAATTCCGGGGTTCGTGGTTATCGTATTGGTAGCACTGATAACAGATGTCACGGTAGAGTTTATGTTGAGGTACACGAGTTCCGGAAAATCCACTACCTATGCGGGTATGGTGGGAGACATACTATGTGGAAATGAGTCCAAAGGAACCACACATTTGGGCATTCTACAAGAATGGTTTGGTATCCACTGGTGGACCTCTCGCGCTTTTGCTCTTCTCATAGTTGCGCTCGTCATAATGCTTCCACTTGTTATGTTACGGCGTGTTGATTCACTCAGGTATAGTTCTGCAATATCAATCCTCCTAGCATTGGTCTTTGTTGCAATATGCTCATCAATGGCGCTTAATGCACTATTGTCTGTCTTTGTGACAGGTTTCGGATTTCATGTCAATGTTCATCCAATTAGAGCAGAGCTTGGAAGACCTAGAGACATGAATTTGGCTGTGCGGATTGCATTGTTAATCTGTGTGGCTATTTACTTTGCTATTGGCTTCTTTGGGTACCTATTATTTGGGGACTCCATCATGCCTGATGTATTGGTAAACTTTGATCAAAACTCCAATTCCGATGCTGGTCGATTGCTCAATGACATTGTGAGACTAAGCTATGCACTCCATCTTGCACTTGTGTTCCCCATCATGAACTATTCCTTGAGGGCTAACATAGATGAACTATTATTCTCAAAGAAAAATAAGCCTGCCCTTGCATTAGACACCCCAAGATTTGTTTCACTTACTCTTGCTTTGCTAGCCCTCACATACTTAGTTGCTGTGGCCATCCCAAATATTTGGTATTTTTTTCAATTCTTGGGATCCACAACCATTGTTTGCCTCTCATTCATATTCCCTGCTGCAATTTGTCTAAGGGATATGCATGGTATATCAACGACCAAAGATCAAGTCATGGCAATTGTGGTGATTGTTTTGGCTGTGGGGACAAGTGGAATTGCTATATGGACCAATTTGTATGGTTCAAGTGCATAA 1191 0.4425 MDNIHDSTPKSKLAPMTNTTAPLLPPDSEHSPEDPIPQNGSISGAVFNVSTTMIGAGIMSVPATMKVLGIIPGFVVIVLVALITDVTVEFMLRYTSSGKSTTYAGMVGDILCGNESKGTTHLGILQEWFGIHWWTSRAFALLIVALVIMLPLVMLRRVDSLRYSSAISILLALVFVAICSSMALNALLSVFVTGFGFHVNVHPIRAELGRPRDMNLAVRIALLICVAIYFAIGFFGYLLFGDSIMPDVLVNFDQNSNSDAGRLLNDIVRLSYALHLALVFPIMNYSLRANIDELLFSKKNKPALALDTPRFVSLTLALLALTYLVAVAIPNIWYFFQFLGSTTIVCLSFIFPAAICLRDMHGISTTKDQVMAIVVIVLAVGTSGIAIWTNLYGSSA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi308g00018 396 MobiDBLite consensus disorder prediction 1 37 - -
Sebi308g00018 396 Pfam Transmembrane amino acid transporter protein 39 178 IPR013057 -
Sebi308g00018 396 Pfam Transmembrane amino acid transporter protein 188 370 IPR013057 -
Sebi308g00018 396 PANTHER AMINO ACID TRANSPORTER 33 380 - -
Sebi308g00018 396 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi308g00018 Sebi-Chr308 414374 418037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi308g00018 23 396 Amino Acid or Auxin Permease AAAP Family AT3G56200 49.420 4.92e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi308g00018 - - gmx:100794031 595.504