Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi308g00014 ATGCCTGAATGTCCAGAGAAAGGCAAGAGGATCAAAAGAGAAGTAGATGGTTCTTCTCAAAAGGGAAGAGGACACATGTTAGGCCCTCCTGGAATGCTTAATACCACTACCCCTTGTGCTGCATGTAAGTTGTTGAGAAGAAGGTGTGCTCAAGAATGTCCTTTTTCTCCATATTTCTCTCCCCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAATGTCTCAAAGATGCTAATGGAGGTACCTGAGAGTCAGAGAGCAGATGCTGCAAATAGTCTAGTTTATGAGGCTAATGTAAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCATCTTTGCAACAACAAGTTCAATCTTTAATAGCTGAACTTAATGCTGTAAGGGCAGAAATACTTAAATACAAACTCAGGGAAGCTAACATGACACCTTCTTCATCTCATGTTTTGCTTCCTTCCTCTGAGGATGTATCAATTGCTGCTCCACCTCCTCCAACACTATCAATGCCTCCTCTTCCTATAACTTCTTCTTCCATTTACACTCAACAGGTGAATCCTACCAATTATAGCACAATTTCAAGTGAGAATAGTTCCTATTTTGGTTAA 624 0.4135 MPECPEKGKRIKREVDGSSQKGRGHMLGPPGMLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLIAELNAVRAEILKYKLREANMTPSSSHVLLPSSEDVSIAAPPPPTLSMPPLPITSSSIYTQQVNPTNYSTISSENSSYFG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi308g00014 207 Pfam Lateral organ boundaries (LOB) domain 38 134 IPR004883 -
Sebi308g00014 207 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Sebi308g00014 207 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 169 - -
Sebi308g00014 207 MobiDBLite consensus disorder prediction 1 20 - -
Sebi308g00014 207 MobiDBLite consensus disorder prediction 1 30 - -
Sebi308g00014 207 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi308g00014 Sebi-Chr308 279419 280365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi308g00014 26 207 AS2 family AT2G40470 71.503 1.72e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi308g00014 LOB 4.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi308g00014 - - ccaj:109797870 303.138