Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi307g00069 ATGGCCGAAACAAAATTGATTCCAGGGTTTCGGTTTCATCCCACTGACGTTGAGCTGGTTAAGTACTTTCTGAAGAGGAAGGTTCTGGGTCGAAAATTCCCTTTTGATGTCATTGCTGAAATTGACATATACAAGTATGCTCCGTGGGATCTCCCAGATAAATCTTTGCTCAGAACTGGGGATTTAGAATGGTACTTCTTTTGCCCTCGTGGAAAGAAATATTCCAGTGGAGGGAGGATGAATCGGGCAACGGAAACTGGGTACTGGAAGACTACTGGGAAGGATAGGTCAATTGAACACAAAAACCAAGTCGTGGGGATGATAAAAACCCTGGTATTTCACACTGGCAGAGCCCCTAAGGGAGACCGAACTGATTGGGTCATGCATGAATTCAGACTTGAAGACAAGGACCTTACTGCCAAAGGCATTCCACAGGATTCCTATGTGATTTGTAGGGTATTCCAGAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGAAAGCCATTTAATGAGGAAGACTGGGACGAAGAGGAAATTGGTTGTGTCCAAACTGTCCCTCTTGCTGCTATATCTCCACAAGTTCCCATTCTACCTAGTGCAAGTCATATTTCTGTTGCAAATGACATGCATCCCTCTAAAATTGGATGCATTGGATTGACCTCTGTATCATGTCTATCAGGATTGATGCCGTCTTGCTCAACAGATCCTTCAGCTCCAAGCAATCAAGTTGATAACAGCATTTTATCTATGCTTGACTTATTCAAAGAAGATGATAACGCATTGGCTGTGAATGAAAGCAATGGAATCAAGGTAAACAACAACAGAGAGGGTCGAGAAAGTGGTGATGATGAAGTTGGAGATGAGACTGATAAGGATGCAGCTGCAATGGAGGATGATTATGCTTGGCACATTAGGGATTTGCTCTAG 933 0.4373 MAETKLIPGFRFHPTDVELVKYFLKRKVLGRKFPFDVIAEIDIYKYAPWDLPDKSLLRTGDLEWYFFCPRGKKYSSGGRMNRATETGYWKTTGKDRSIEHKNQVVGMIKTLVFHTGRAPKGDRTDWVMHEFRLEDKDLTAKGIPQDSYVICRVFQKEGPGPRNGAQYGKPFNEEDWDEEEIGCVQTVPLAAISPQVPILPSASHISVANDMHPSKIGCIGLTSVSCLSGLMPSCSTDPSAPSNQVDNSILSMLDLFKEDDNALAVNESNGIKVNNNREGRESGDDEVGDETDKDAAAMEDDYAWHIRDLL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi307g00069 310 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Sebi307g00069 310 MobiDBLite consensus disorder prediction 273 296 - -
Sebi307g00069 310 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Sebi307g00069 310 FunFam Nac domain-containing protein 86 15 159 - -
Sebi307g00069 310 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Sebi307g00069 310 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Sebi307g00069 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi307g00069 Sebi-Chr307 1087910 1090036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi307g00069 1 268 NAC Transcription Factor Family AT5G09330 51.557 4.41e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi307g00069 NAM 6.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi307g00069 - - adu:107470479 411.379