Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi306g00047 ATGTCTGGGAGACTCGGAAAAAGCAGCAGATCAATCCGCCACATCGTGAGGCTCCGGCAAATGCTGCGGCGGTGGCGGAACAAGGCCCGCATGTCAGCCCATAGATCACCGCCTGATGTTCCTGCGGGACACGTGGCGGTGTGTGTGGGCACCAACTACAAGAGATTTGTGGTGCGCGCAACCTACCTGAACCACCCCATCTTCGAGAAGCTACTGGTTCAAGCAGAGGAAGAGTACGGGCTCTCAAACAATGGTCCCCTCGCCATTCCCTGCGACGAACTGCTCTTCGAAGAGATCATCCGGTTTATTTCACGGTCCGGTTCGTCTGGCAACTCGACCCGGTTCGAGGACTTTCAAAGGTACTGCCACGCTGGCATCAAGAATAAGAATAACAACCTGGACTTATACCCCGAGTCTCGACCGCTACTCACTCACAATTCACAAATAACAAAACTATTTGGTGGACCGGAATGA 474 0.5359 MSGRLGKSSRSIRHIVRLRQMLRRWRNKARMSAHRSPPDVPAGHVAVCVGTNYKRFVVRATYLNHPIFEKLLVQAEEEYGLSNNGPLAIPCDELLFEEIIRFISRSGSSGNSTRFEDFQRYCHAGIKNKNNNLDLYPESRPLLTHNSQITKLFGGPE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi306g00047 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 99 IPR003676 GO:0009733
Sebi306g00047 157 Pfam Auxin responsive protein 17 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi306g00047 Sebi-Chr306 985557 986030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi306g00047 5 143 Calmodulin-binding Proteins AT4G34750 50.676 9.26e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi306g00047 K14488 - qsa:O6P43_018667 206.838