Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi306g00041 ATGGGAGGGCCAAGTCATAGTGATATTTTCTGGAGATGTACTGCTGGTGCATGCAGAAGTATTGGAGGAAAAGAGTCATTGAGAATTGAAATAAGGGCAGTCTTACTTGTGGTTGTGGGCAAATCTTCCACTATATGTCCAGTTTTACTGAGAGGCATCAGTTTCATGCTTAGTAGCTTGGTTAGGTTATTCTTATCTGAGGAATCTCCTTCACAAGTTGGGTTAAATTCTCAAGATCACCTCCAAGCAAAGATATCATTGCAGCATCCAGGAGGAGCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAAGGAACTCATGCTTCAAGTCAGTTTGAGATAAAGCCATCCCAAATACCTGTTATTAGGTGGATTAATCCACCAAAGATTGTGCTGAATCTCGCATGGCAAGTGGTGGCCGGGGAAGAAAGCAAAGAGGTAGAAGATCAACATCAAAGGGAGAGGAGAGTACTTGAAGCTATTTATCCTCGCATATCTTCCATTCCTCCAAACCCTGCTGTTTCAATGGATGTTGAAAATTCCCATTACATTGATGGTCAAACTACTTTGATACCAATTACACCTATTGAAGATGAAGATGCGGCAGCAGATATAGTATCTGATTCCTTGGAACGACAGTCTGTCGAATTACCTCCTGGTATATTGAAGGGTTCAAATTCTGCTACAAGTATCCAGTTAGCTCATGGTCTAGTGTCTGATGTAGCTGCTGCATCGGTTGCTTTAACTAACATAGTGAAGAGCAATGAGCATGGAAATTTGATTGACCATGAATTACTAAAAAATATTCTCAACAATCCAGAAGTAATTGAGAAGTTGGTTAGAGATTATGGAGTTACTAATAATTCACAGCATGTACATAATGTGGGATCATCTTCAGTAGCTTTTTCACATCCTCCTATTCCTATTAATCAAGGAGAAACCACTACACCTTCGTCAGTTGCTTTTTCAGCCACTTCTTCCTATAATCACCCAACTGGAGGTCAGGTGGCAACTGTTTCTAGCCAATGGCATACTAGGCCTGCAGTGAGTTCAGCTACTGTTTCTTCTTCTGCTGAGGTCCCTTCAACTAAAGATGTAAACTACTATAAGAGCTTAATTCAACAACATGGAGGAGACAAACAAGAAACACTTCCATACTCCAGTAATCGTCAGATCCAGCAGCCAGTAACAAACTACGAGACACCATACAATATTAGAACAAAAGGGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTTAACAGTTCTAGAGGATGTCGGAATGGTGCTAACTGTGCATACCAGCATGATGCATCATTTCAGCCACGAGGCAATAATGTATCTGGGATACAAAGTTCAAAGAGAATGAAAATGGATAATGAGATTAGCAGTTAA 1398 0.4041 MGGPSHSDIFWRCTAGACRSIGGKESLRIEIRAVLLVVVGKSSTICPVLLRGISFMLSSLVRLFLSEESPSQVGLNSQDHLQAKISLQHPGGAGSDDILPPGFEGTHASSQFEIKPSQIPVIRWINPPKIVLNLAWQVVAGEESKEVEDQHQRERRVLEAIYPRISSIPPNPAVSMDVENSHYIDGQTTLIPITPIEDEDAAADIVSDSLERQSVELPPGILKGSNSATSIQLAHGLVSDVAAASVALTNIVKSNEHGNLIDHELLKNILNNPEVIEKLVRDYGVTNNSQHVHNVGSSSVAFSHPPIPINQGETTTPSSVAFSATSSYNHPTGGQVATVSSQWHTRPAVSSATVSSSAEVPSTKDVNYYKSLIQQHGGDKQETLPYSSNRQIQQPVTNYETPYNIRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNNVSGIQSSKRMKMDNEISS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi306g00041 465 MobiDBLite consensus disorder prediction 444 465 - -
Sebi306g00041 465 ProSiteProfiles Zinc finger C3H1-type profile. 412 440 IPR000571 GO:0046872
Sebi306g00041 465 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 297 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi306g00041 Sebi-Chr306 924252 926897 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sebi306g00041 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi306g00041 - - gmx:100783321 603.979