Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi306g00039 ATGGGGAAATCTACCTCCTGCTTCAGACTAATCACATGTGCCGGCGATTCGGCGGAGAATGATGATTTCCAAGTATCTGAGATCAAGGATTCTAATGATAAACGTGGTTGGAGTTTCCGGAAGAAATCTGCAAGGCACCGTGTGCTTAGCAATACCGTCATAGCCGAGGCCCCATCTTCTGCTAATAATAAGGAGAGTTCAGAATGTGCAAATTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTGCACAACAAATTTCTCTAATGAGAAGCCTCAGTTATCCTCCTTTGAAAGCTCACAAATTGCAGAAAGTAATGTCATTGAAACTGAGAGCAAGGTGGATGTGGATCCACCAGAGTCCGCTGTTATCATCATCCAGGCTGCAATCAGAGGGTTAATGGCTCAGAGAGAACTACTACAGCTTAAGAATGTAGTGAAATTGCAAGCTGCTGTTCGCGGGCACTTGGTCAGGAGGCATGCTGTAGGAACCTTACGTTGTGTTCAAGCCATCGCGAAAATGCAGGTCCTTGTGCGAGCTCGTCGTGTTAAGCAGGCACATCTGGAAAATCATTTAAGTCACAAGGATGGAAATGATTCCTCAAAAGCTTTGGGGAATGAAAATCACGTGACCAAACCAAATATAATGTACACTTCCACTGAGAAGCTGCTTAGTAATAGGTTTGCTCGCCAGCTGTTGGAGTCATCACCAAAGAACAAACCTATCCATGTCAAGTGTGATCCTTCTAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGGTGGATGTCTGTAACATCAAAAGATGTTGCTGAGTTAAAAAAAACTAGCTCTTTGACAGATCAATCAGACAAAAACAAAGATAGCACTTCTATTTGTCAATTAGAAACAGGTATTCCGCCTGAAGTCTTTCTCCAGTCAGCTGACTCAAAGCCCACTGTTGAGGATTCACCTCTACTTTCTGAGGATGAAGAGAAGGTGATTACTTATGACGCCAGTAACTTAAAGTTGCATTCAAGCTGTCCCACATCATCTATTGTAAAAGAGGACCTGGAGCAGGTTCCTCCTGAAGAAATCATTACATATGATGCTAAAGTAGCCTCAGCAGAAACTGATTCCTTCCAAAATGAAATATCAGCATCAGATGCAAGTGCACCAGAGCTTAGTATTAATTCTCTTCATCAGAAGCCTGAAATTGATGGTGACCAGCAAAAACGATCTTTGAAAAGATTTGCCTCAGACCAACTAGAGGCTGAAGGAAAGAAACCTGTAAATGGATCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTTCAATGGCTAATTCAGGTAGGACAAGCAGTGTGTCCTATCAAGATGCATCAGTTGAATCACAAGGAGATACCTCTTTAGTCGGCACAGATAATGCATATAGATCAAAAGATTTATCATCTGAAAATTCTGCTCCCTTTCTTTCAAGAGTTGGTGGTTCTGAATGTGGTACTGAACTTTCCATCTCTTCCACTCTTGATTCACCTGACGTGTCAGAGGTTGGTGCTACGGAAAATGAGCAGCATGATGCCAAAGATTTAGTAGAAGGGACTGGTAATCTTGAAAACAGGATAAACCATGATGATGAGGCCAATGTTCAATGTGCCATTCCAGCTTCTAACTTAGCTACCTCTGTTCTGGATCAGTCAGAGATTGTTGATGACATCAGTGGCAATATGGTTCACTCAGTAGTAGCTGTCAACTCTGAAGAGCCTACTACTAAGACTGAGATAAATACATCTGACCAGGAGAAAGAGCAGGCGGAGGCTATTGTGCAAGGTTCCAGATCATCTCCAGAAGCTTCACCTAGAAGCCATATAACTGTCCCTGAATCACAAGGAACACCTTCGAGTCAGGTATCTATAAAACCTAAAAAGGGCAAAATCAACAAGACAGGATCCAACAGTAAACACGGTACCCTCTCAGTGGGCAACAAATCACCTGCAAATGCAAATGATGATTCAGGTTCGAGAGGCAGTAGGGAGCAACTGCCTAAAGATCAGCGGAGTGGGAAGAGACGCAATTCCTTTGGCTTAGTAAAACCTGATCACATTGATCAAGAACCTAGAGATAGTAGTAGTAACAATAATTCTCTTCCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGGTCAATGCTAATAACTCTCCTAGATCAAGTCCAGATGTGCATGAACGAGACATCCAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAGGCAGGTTTCTCCACGCATCCAACGATCAATGTCTCAGGCACAGCAGAGTGCAAAGGGAAACGGTGTACATCCTCCTCAAGACAATAAAAATGTTTTATAA 2394 0.4256 MGKSTSCFRLITCAGDSAENDDFQVSEIKDSNDKRGWSFRKKSARHRVLSNTVIAEAPSSANNKESSECANFNFQPLPEPNVVEKICTTNFSNEKPQLSSFESSQIAESNVIETESKVDVDPPESAVIIIQAAIRGLMAQRELLQLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIAKMQVLVRARRVKQAHLENHLSHKDGNDSSKALGNENHVTKPNIMYTSTEKLLSNRFARQLLESSPKNKPIHVKCDPSKADSAWKWLERWMSVTSKDVAELKKTSSLTDQSDKNKDSTSICQLETGIPPEVFLQSADSKPTVEDSPLLSEDEEKVITYDASNLKLHSSCPTSSIVKEDLEQVPPEEIITYDAKVASAETDSFQNEISASDASAPELSINSLHQKPEIDGDQQKRSLKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEELSSMANSGRTSSVSYQDASVESQGDTSLVGTDNAYRSKDLSSENSAPFLSRVGGSECGTELSISSTLDSPDVSEVGATENEQHDAKDLVEGTGNLENRINHDDEANVQCAIPASNLATSVLDQSEIVDDISGNMVHSVVAVNSEEPTTKTEINTSDQEKEQAEAIVQGSRSSPEASPRSHITVPESQGTPSSQVSIKPKKGKINKTGSNSKHGTLSVGNKSPANANDDSGSRGSREQLPKDQRSGKRRNSFGLVKPDHIDQEPRDSSSNNNSLPHFMQATESARAKVNANNSPRSSPDVHERDIQVKKRHSLPGATGRQVSPRIQRSMSQAQQSAKGNGVHPPQDNKNVL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi306g00039 797 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Sebi306g00039 797 Pfam IQ calmodulin-binding motif 125 143 IPR000048 GO:0005515
Sebi306g00039 797 Pfam Protein of unknown function (DUF4005) 703 780 IPR025064 -
Sebi306g00039 797 PANTHER IQ-DOMAIN 5-RELATED 1 767 - -
Sebi306g00039 797 MobiDBLite consensus disorder prediction 712 742 - -
Sebi306g00039 797 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Sebi306g00039 797 MobiDBLite consensus disorder prediction 588 797 - -
Sebi306g00039 797 Gene3D - 121 174 - -
Sebi306g00039 797 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Sebi306g00039 797 MobiDBLite consensus disorder prediction 765 797 - -
Sebi306g00039 797 SMART iq_5 145 166 IPR000048 GO:0005515
Sebi306g00039 797 SMART iq_5 122 144 IPR000048 GO:0005515
Sebi306g00039 797 MobiDBLite consensus disorder prediction 606 679 - -
Sebi306g00039 797 MobiDBLite consensus disorder prediction 506 528 - -
Sebi306g00039 797 MobiDBLite consensus disorder prediction 193 213 - -
Sebi306g00039 797 MobiDBLite consensus disorder prediction 506 523 - -
Sebi306g00039 797 MobiDBLite consensus disorder prediction 680 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi306g00039 Sebi-Chr306 898607 904666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi306g00039 113 783 IQD Protein Family AT1G19870 38.946 1.28e-113 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi306g00039 - - gmx:100799424 1164.83