Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi306g00016 ATGGATCTGCTACGATCGGAGCCTATGCAGCTGGTTCAATTGATCATTCCAATCGAAGCAGCTTATCGATCCATCTCGTACCTTGGTGATCTCGGCCTCTTCCAATTCAAAGACCTTAATGCAGACAAAAGCCCATTCCAACGGACTTATGCTGCTCAGATTAAAAGATGTAGCGAAATGGCACGTACGCTACGGTTATTTAAGGAACAAATGACGAAGGCAGGTGTGTCACCCTCAACACGATCAACAAGAGACGGTGATGTTGATGTGGAAAATTTGGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTACTGGAGATTAATGGAAATAACGAGAAGTTGCAACACTCCTACAATGAGCTATCAGAGTATAAGCTTGTTCTAGAGAAGGTTGGTCAGATTTTCTCTTCGGCACAAAATAGTGCTGTAGCTCACCAGAGGGAGATTGAAGTTCAGACAATTGGTGAAGGGTCTATTGGCAGCCCATTATTACTGGAACAAGAGACGACGGCATATCCGTTAAAGCAGGTTAAGCTGGGGTTTATCAGTGGTCTTGTTCCCAGAGAAAAAGCAATTCCTTTCGAAAGAATTTTATTTCGTGCTACTCGGGGAAATGTATTTCTGAAGCAGGCTGTGGTTGCACATCCTGTTCTTGATCCTTTATCAGGAGAGAAGGTTACTAGTTCTAAAATAGTAAAATCTTAA 705 0.427 MDLLRSEPMQLVQLIIPIEAAYRSISYLGDLGLFQFKDLNADKSPFQRTYAAQIKRCSEMARTLRLFKEQMTKAGVSPSTRSTRDGDVDVENLEVKLAELEAELLEINGNNEKLQHSYNELSEYKLVLEKVGQIFSSAQNSAVAHQREIEVQTIGEGSIGSPLLLEQETTAYPLKQVKLGFISGLVPREKAIPFERILFRATRGNVFLKQAVVAHPVLDPLSGEKVTSSKIVKS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi306g00016 234 Pfam V-type ATPase 116kDa subunit family 27 229 IPR002490 GO:0033179|GO:0046961|GO:1902600
Sebi306g00016 234 Coils Coil 83 117 - -
Sebi306g00016 234 PANTHER VACUOLAR PROTON ATPASES 3 229 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi306g00016 Sebi-Chr306 302595 304704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi306g00016 1 232 Primary Pumps ATPases(2) AT4G39080 62.931 1.11e-98 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi306g00016 K02154 - gmx:100805813 337.421