Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi305g00042 ATGGAAGACAGGGGTAATATGGTTAATGAGGGTGAAGCTGGAGATATAAATAACTTGAAATCCCCTGAAAAAGAAAATGCTTGTTCTGGTGAGGCTGTTCCTGATGTGTACAAAAGGATTTCTGAGTTAACTGATGATGAAATTAGGATGCTTGAGTTTGATTCTGAACTGGAGGCATATAATTTTTATTGTGAATATGTGAAATTCATAGGTTTTGCGGTTAGGAAAGATTATGTATATCGTGATCGTAATAGGTTTATTACTATGAGGCAGTTGGTCTGTAACAGGCAAGGGGAAAGGAGTGAGAAACATTTAAATAGGACGGATAGAGTTAGGGAAGCTAAGGCCATTACTCGGACCAATTGTCTTGCAAGGCTTCGACTGTATTTAGATGGTGATAGTGGTAAGTGGAAGGTTGGAATGTTTGAGTCACAACACAATCATGAGCTTACTCTTGAAAATATGGTTCATTTGATGCCTGCTTATCGTGGTTTGAGTGTTGTTGATAAGGCACAAGTAAATAGTTTTCACTTATATGGTGTTAGGACTTGTCATATAATGGGGCTAATAATGGGTCAGAAAGATGGTTACTCAGATTTGAGATTTTGTAAGAAGGACTTGTACAATCACATTGACAAGGAAAATAGGGCCAAAATAGAGGATGGAGATGCTTTTGCTGCTTTGTGCCATCTTCAAGCTAAGTATGATAGTAATCCAATGACATTTGTTAAGTTCACAACTACTGAAGATGATAGGCTTGAAAACTTGTTCTGGGTTGATGTAGGAAGCAGAATTGATTATGCTTGTTTCGGTGATGTAGTTGCATTTGACACAACATATAAAAAAACAAGTATAACAGGCCTTTGTTATGCTCTTGTTTCTGATGAGAAGACAGAAACCTATAAATGGGTACTTGAAGCATTTCTAGAAGCTATGTTCAATAAAGAACCTAAGGCAGTTGTTACTGATGGGGATGGTGCCATGTGTGAAGCTATAAGATCTGTGCTTCCAGGTTCTATCCACAGGTTGTGTTCATGGCATCTCCACCAAAATGCCTATGAGAATGTCAAGAATCTGAAATTTTTGGAAGATTTTAAGAAGTTAATTTATGTTAATTTTACACCTGAGAAGTTTGAGCAAGAATGGGTACATGTTATTGAGAAACATGGTTTGAGCAATAATAGGTGGGTGAGGAAGGTTTATGACCTCAAGAGGATGTGGGCTACTGCATTTTTCAGAGATAACATTTTTGCTGGTGTCCGGACTACCTCCATTTGTGAAGGTATTAATTCTTTTATCAAGAGATATGTTCAAAGTAAAAATAGTCTGGTTGATTTTCTTCACAATTTTGAAAGAGCTTTGAATGAGTATAGGCACAATAAATTAGCTTCTGATTTTAAATCTACATACACCCACCCAGTTCTGACAACTGCCTTGGAAAAGTATGAAGTTCATGCTTGTAATGTATACACGAGGAATAAGTTTTTTGAAATTAGAAAGGAAATTGAGAAAGTTGCTGCGTTGAATATGATTGAAAAGTTCGAGGTAGGTAATATTGTGACAATGAAGATGAACAAATTTGGAAGTCCTGATTTTGTATATGTTGTTCTACTTGATAAGTCTGTTGGTGATATTTCTAAAAAGGAAGTGTTGAGATCCGGTGTTGTGGGTGTTGCTTGCAATAGGCTTAACAAGGCTACACATAAAAATCCTCATAACTTTATGAAAAACATTGAGGCCATCCATCAATTAGCAGATCAAATGGAAACGCAAGATGGAGTTGATGTCAACATTGCTGACATATCAAGGGTTGTCTGTGATCCAACCATTGTTAAAACTAAAGGTGCACCTCGTAAGAGGCACACAATTAGGACATGTTCCAAGTTCTCAACTCGAGATCAGCTTCAAACTGTAGAAGAAGAAGAGTCTTCAGTTGAGAGTGATGGAGAATCAAGAAATGGACCATTGATTAGTAAAAAATCTAATAAGAGGATGAAGCACAATGATTCTGTCAAGTTAACTCAAGAGTCTGTAAATGATAGGCCACAAGTAAATGATGTAACCAATGTTGAAATGAGGGATTGTTCAAGGTCAATGGATCATGTGAATCATATGAGTCATCAAATGTGA 2130 0.3676 MEDRGNMVNEGEAGDINNLKSPEKENACSGEAVPDVYKRISELTDDEIRMLEFDSELEAYNFYCEYVKFIGFAVRKDYVYRDRNRFITMRQLVCNRQGERSEKHLNRTDRVREAKAITRTNCLARLRLYLDGDSGKWKVGMFESQHNHELTLENMVHLMPAYRGLSVVDKAQVNSFHLYGVRTCHIMGLIMGQKDGYSDLRFCKKDLYNHIDKENRAKIEDGDAFAALCHLQAKYDSNPMTFVKFTTTEDDRLENLFWVDVGSRIDYACFGDVVAFDTTYKKTSITGLCYALVSDEKTETYKWVLEAFLEAMFNKEPKAVVTDGDGAMCEAIRSVLPGSIHRLCSWHLHQNAYENVKNLKFLEDFKKLIYVNFTPEKFEQEWVHVIEKHGLSNNRWVRKVYDLKRMWATAFFRDNIFAGVRTTSICEGINSFIKRYVQSKNSLVDFLHNFERALNEYRHNKLASDFKSTYTHPVLTTALEKYEVHACNVYTRNKFFEIRKEIEKVAALNMIEKFEVGNIVTMKMNKFGSPDFVYVVLLDKSVGDISKKEVLRSGVVGVACNRLNKATHKNPHNFMKNIEAIHQLADQMETQDGVDVNIADISRVVCDPTIVKTKGAPRKRHTIRTCSKFSTRDQLQTVEEEESSVESDGESRNGPLISKKSNKRMKHNDSVKLTQESVNDRPQVNDVTNVEMRDCSRSMDHVNHMSHQM 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi305g00042 709 Pfam MULE transposase domain 282 351 IPR018289 -
Sebi305g00042 709 MobiDBLite consensus disorder prediction 631 680 - -
Sebi305g00042 709 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Sebi305g00042 709 MobiDBLite consensus disorder prediction 1 27 - -
Sebi305g00042 709 PANTHER OS01G0519700 PROTEIN 51 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi305g00042 Sebi-Chr305 756210 758943 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi305g00042 FAR1 4.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi305g00042 - - vvo:131629359 615.15