Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi305g00021 ATGTACTGTCATCAGCAGCAGCAACAAGCTAAGAACATCCACGCTTTAAGGATGCAAGGAGGAGGCAATGGAGCTGGAGATTCAGGACTTGTTCTCTCAACTGATGCTAAGCCTAGACTAAAATGGACGCCAGATCTTCATGAACGGTTCATAGAAGCAGTCAATCAACTTGGAGGAGCAGATAAAGCTACACCAAAAACGGTATTGAAAATTATGGGGATCCCTGGACTTACTCTATACCACTTGAAGAGTCACCTACAGAAATACAGGATCAGTAAAAATATGCATGGCCAAACCAATACTGGCAACAACAAAATAGCATCAACCACAGAAGCACCAGGCAGAATGTCAGAAGCAAGTGGAATCCAAATGAAACATTTAAGCATAGGACTCCAGACAAACAAAAATTCAGAAATAAATGAGGCCTTAGAGATGCAGATTGAAGTGCAAAGAAGACTACATGAGCAGCTTGAGGTACAGCGACACTTACAGCTATGGATAGAGGCTCAAGGAAAGTACCTTCAGACAGTGCTGGAAAAAGCTAGGGAGACACTAGGAAGACAAAATTTAGGTACTGTGGGAATTGATGCTGCAAAGGTTCAACTGTCTGAACTGGCATCCAGAGTATCCACTCAATGCCTTGATTCTAAATTTTCAGAACTGAAAGAATTGCAGGTACTGTGGCCTCAGCAAACACAAGAAGGCAAAGCCATTGATTGTTCAATGGGCAGTTTCTTAACCTACAGTGAGGAATCTGAAAGAGACCAAGAAACACATAACGGGGGCTTGAATTTGAGAGCATACAATGGCACTCCTTTCTTAGCTTCGAAAGAGTGTGTGGAGGAAGAGTCTATGCTTTTAAAGTCTGATCTCTCATTGTGTGAAGAAGTGAAGGAGAATAATATGATGTTTCTTTCCTCATCAAATGATGAAGTACTAAAGGGGAAGTTTTTACCAGAAAGGACCTCAAGCCTCTTATCCATGAATGTGGGAGTTCCAGAAGAAAAATTTGGAAGAATAACTGTTTCAAAGGAAGATTTAAAAGGTGAAGGCTGGAAGAGAAGAGACAGTAGTGAAACTAGTCGAGTGCCAGTTAAAATGAACCATGACAAAGTTTCTCAAGATTATAGACTGGCTAACCTTGAAGTGAAACTGGACCTAAATTCCCATGGTGATAATGATGCTTCTTCCCAATACCAAAGGTTTGACTTGAATGGTTTCAGCTGGAATTGCTAG 1236 0.4118 MYCHQQQQQAKNIHALRMQGGGNGAGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKIMGIPGLTLYHLKSHLQKYRISKNMHGQTNTGNNKIASTTEAPGRMSEASGIQMKHLSIGLQTNKNSEINEALEMQIEVQRRLHEQLEVQRHLQLWIEAQGKYLQTVLEKARETLGRQNLGTVGIDAAKVQLSELASRVSTQCLDSKFSELKELQVLWPQQTQEGKAIDCSMGSFLTYSEESERDQETHNGGLNLRAYNGTPFLASKECVEEESMLLKSDLSLCEEVKENNMMFLSSSNDEVLKGKFLPERTSSLLSMNVGVPEEKFGRITVSKEDLKGEGWKRRDSSETSRVPVKMNHDKVSQDYRLANLEVKLDLNSHGDNDASSQYQRFDLNGFSWNC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi305g00021 411 Pfam Myb-like DNA-binding domain 39 90 IPR001005 -
Sebi305g00021 411 FunFam Myb family transcription factor 36 94 - -
Sebi305g00021 411 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 264 IPR044848 GO:0003700
Sebi305g00021 411 Gene3D - 36 94 - -
Sebi305g00021 411 MobiDBLite consensus disorder prediction 348 367 - -
Sebi305g00021 411 Coils Coil 140 160 - -
Sebi305g00021 411 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 92 IPR006447 GO:0003677
Sebi305g00021 411 SUPERFAMILY Homeodomain-like 36 92 IPR009057 -
Sebi305g00021 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 94 IPR017930 -
Sebi305g00021 411 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi305g00021 Sebi-Chr305 310367 312619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi305g00021 69 410 G2-like Transcription Factor Family AT3G04030 48.688 2.92e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi305g00021 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi305g00021 - - gmx:100786282 635.18