Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi305g00007 ATGGTTAGTGCAATAAAGGCAGCAATTGGAGATGCAGTGTTGACTTTCATGTGGGTCTTCGTCTCTTCCACGCTTGGATTGGTCACCAGCGCCATAACCAAAGCTCTTGATCTTCATCTTGTGTCATACAATGGTCTTGATTACCCTTCTATTATAATCACCACTTTGCTCATCTTTGTCCTTGTCTTCATCTTCACAATCATTGGCAATGCTTTGGGTGGTGCCAGCTTCAACCCCACCGGCAATGCTTCCTTCTATGCAGCTGGTCTTGGCTCAGACACCCTTTTCTCTATGGCTCTCCGTTTCCCCGCTCAGGCTCTAGGTGCAGTTGGTGGTGCTTTGGCAATTATGGAGGTGATGCCACCAAAATACAGGCACATGATTATAGGACCTTCTTTGAAGGTTGACTTGCATACTGGAGCTGTTGCAGAAGGGGTGTTGACATTTGTAATCACTTTTGCTGTCCTATTCATCATGATCAGGGGTCCCCGTAGTGAAATGGTGAAAACTTGGATGATGGCAATGTCAACCGTGCCTTTGATTATTGCCGGTTCTACTTACACAGGACCATCCATGAATCCTGCCTTGTGGTCTTAG 597 0.464 MVSAIKAAIGDAVLTFMWVFVSSTLGLVTSAITKALDLHLVSYNGLDYPSIIITTLLIFVLVFIFTIIGNALGGASFNPTGNASFYAAGLGSDTLFSMALRFPAQALGAVGGALAIMEVMPPKYRHMIIGPSLKVDLHTGAVAEGVLTFVITFAVLFIMIRGPRSEMVKTWMMAMSTVPLIIAGSTYTGPSMNPALWS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi305g00007 198 SUPERFAMILY Aquaporin-like 3 196 IPR023271 -
Sebi305g00007 198 Gene3D Glycerol uptake facilitator protein. 1 197 IPR023271 -
Sebi305g00007 198 Pfam Major intrinsic protein 2 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi305g00007 198 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi305g00007 198 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi305g00007 198 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi305g00007 198 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi305g00007 198 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi305g00007 198 PANTHER AQUAPORIN SIP1-1 4 195 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi305g00007 Sebi-Chr305 139187 140424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi305g00007 1 196 Major Intrinsic Protein MIP AT3G04090 55.612 1.85e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi305g00007 K09875 - gmx:100803227 300.827