Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00066 ATGTCATTTCCAGCAGAAAGAATGCGAGCAATGTATCGAAATCCTCTCTGGCAGGTCAAATCTGTGTTGGACATGAGACATAATGAGCATTACAAGGTCTATAATCTCTGTATAGAAGAAAGTTATGATCCAGCACACTTCTATGGGCGTGTGGAAACATTCCCTTTCGATGACAATCATGTGCCATCTCTTGAAATGATCAAAGCTTTCTGTGAAAGTGTGGATTCATGGTTATCACAGGACCCAAAAAATATTGCTGTTATTCATTGCATGGCAGGAAAAGGTAGAACTGGTTTAATGGTGTGTGCATACCTAACTTATTGCGGCATGTCAGCAGATGAGGCTCTTCAATTGTATGCAATTAGACGGACAACTAATAATGAAGGAGTATCAATACCAAGCCAACGTCGTTATGTGGGGTACTGGGAAAGTCTACTTTCTACCCCTAGGGGCAATGGATATGGATCACCAATGGTAAACTTGCCTCAACCATGTAGCAGAGAATTGAGGAGAATTCGGCTGTATGATACAGTCAACATTGACACAATATTCTTTGTGATCTCAGAGCTGCAAGAGGTTCCTAATGAGGTCTATCGTCCACCAGTGGAAGTTAACAGAAGCTGTTGTAGACAGATTAAGAAAGGATATCAGAGAAACAATAGTCCTCGGTATTATATATCTATTCTTGAAGGTGATGAAGATGGAAAACAATCAGAAATTGAAGAACCTCGTGTTGTAGTTCAAATGGACACAGAGAGTCCTGCAATATACCAAAAGTCCTGTTTGGACCATTATTTTGATAAACCTATAAGA 813 0.3998 MSFPAERMRAMYRNPLWQVKSVLDMRHNEHYKVYNLCIEESYDPAHFYGRVETFPFDDNHVPSLEMIKAFCESVDSWLSQDPKNIAVIHCMAGKGRTGLMVCAYLTYCGMSADEALQLYAIRRTTNNEGVSIPSQRRYVGYWESLLSTPRGNGYGSPMVNLPQPCSRELRRIRLYDTVNIDTIFFVISELQEVPNEVYRPPVEVNRSCCRQIKKGYQRNNSPRYYISILEGDEDGKQSEIEEPRVVVQMDTESPAIYQKSCLDHYFDKPIR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00066 271 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1 147 IPR029021 -
Sebi303g00066 271 ProSiteProfiles Phosphatase tensin-type domain profile. 1 149 IPR029023 -
Sebi303g00066 271 Pfam Tyrosine phosphatase family 69 125 IPR026893 GO:0004721
Sebi303g00066 271 Gene3D Protein tyrosine phosphatase superfamily 1 161 IPR029021 -
Sebi303g00066 271 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 68 123 IPR000387 GO:0016311|GO:0016791
Sebi303g00066 271 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 254 - -
Sebi303g00066 271 ProSitePatterns Tyrosine specific protein phosphatases active site. 88 98 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00066 Sebi-Chr303 1010082 1012694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00066 1 271 Protein tyrosine phosphatase (PTP) family AT5G39400 73.993 5.69e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00066 K01110 - gmx:100809938 504.597