Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00063 ATGGATTCCTATTCCTTAGAGAAAGAGAATGATACCCTCTCTGCCATGGTGCTTGGTTTCAATGTGGCTTTCCCTGTCGTCCTTAACGCTTCAATTGAACTCAAACTATTTGAGATCATTGCCAAGGAAAGTGAATATCATGGTTTTATGTCAGCCTTTGAAATTGCTTCCAAGCTACCAACCAAACACTCTGATTTACCAAATAGGCTCGACCGTGTCCTGCGCTTGCTTGCTAGTTACTCTCTTCTCACTGTCTCCACTCGCACCAATGAGGATGGTAGCATGGTGATAGTTTATGGAATCTCACCATCTGGTAAATATTTCGTTGATGATGAGAACGGTGATGGTAATCTTGCTTCATTCGCATCATTCTCATGTCACCATACTTTGTCAGCAGGGATGTGGCTGAATTTTGGAGAAGAAATTGTTGATCTTGAAATTGACATGCACAAGAAAGTTCATGGAAAATCTTTATACGAGTACATGGAGAAAGATGTAGAAATGAAGCAAGCATTCAACAAATCAATGAGTGATATAAGCTCAATCCATATGAAAAGAATACTTGAAATATACACGGGATACGAGGGAGTATCAACTTTAATTGATGTCGGAGGTGGAAATGGACAAAGTCTCAAAATGATCATCTCTAAATACCCATCAATCAAGGGAGTTAACTTTGACCTCCCACAAGTTATTGAAAATGCACCACCTTTTCCTGGGATTGAGCATGTTGGAGGGAACATGTTTGAAAGTGTTCCATTTGGTGATGCCATAATATTAAAGGTTGTTTGTCGTGCTTTCTCTATTATGGGAGTGATGGAATTTTATAAATAA 834 0.3909 MDSYSLEKENDTLSAMVLGFNVAFPVVLNASIELKLFEIIAKESEYHGFMSAFEIASKLPTKHSDLPNRLDRVLRLLASYSLLTVSTRTNEDGSMVIVYGISPSGKYFVDDENGDGNLASFASFSCHHTLSAGMWLNFGEEIVDLEIDMHKKVHGKSLYEYMEKDVEMKQAFNKSMSDISSIHMKRILEIYTGYEGVSTLIDVGGGNGQSLKMIISKYPSIKGVNFDLPQVIENAPPFPGIEHVGGNMFESVPFGDAIILKVVCRAFSIMGVMEFYK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00063 277 Gene3D - 2 108 IPR036388 -
Sebi303g00063 277 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Sebi303g00063 277 SUPERFAMILY "Winged helix" DNA-binding domain 9 112 IPR036390 -
Sebi303g00063 277 PANTHER O-METHYLTRANSFERASE 18 266 IPR016461 GO:0008168
Sebi303g00063 277 Gene3D Vaccinia Virus protein VP39 111 272 IPR029063 -
Sebi303g00063 277 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 277 IPR016461 GO:0008168
Sebi303g00063 277 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 267 IPR029063 -
Sebi303g00063 277 Pfam Dimerisation domain 27 78 IPR012967 GO:0046983
Sebi303g00063 277 Pfam O-methyltransferase domain 136 268 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00063 Sebi-Chr303 985349 987595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00063 12 277 Monolignol Biosynthesis Gene Families AT5G54160 45.896 3.81e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00063 - - gmx:100798295 347.821