Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00062 ATGGGTTCCTATTCCGTAGAGAAAGAGAACCATGTGGTGGCCCCACAAAGGGATGACAGTCATACCCTGTCTGCCATGGTGCTTGGTGCTAATATGGTGTTTCCAGCAGCACTTAATGCTGCAATTGAACTCAAACTATTTGAGATCATTGCTAAGGAAAGTTCACCTGAAAATGGTGGATTCATGTCAGTCTTTGAAATTGCTTCAAAGCTACCAACTCAACACTCTGACTTGCCATATAGGCTTGACCGTGTGTTGCGTTTGCTTGCAAGTTACGATCTTCTCTCTGTTTCCTCTCGCACCAATGAGGATGGAAGTGTCCTGAGAGTTTATGGCATCTCACCATCTGGAAAATATTTCTTCTTTGATGAAAATAGTGATGGCTATCTTGCCTCATTCACATCATTTCTATGTCACCCTGCACTCTCACGCTTGTGGTTGAATTTTAAGGAAGCAGTTGTTGATCCTGAGATTGACCTATTCAAGAAAGTAAATGGAATATCTAAGTATGAGTACTTTGGTAAAGATGCACAACTAAACCATGTATTTAACAAATCAATGACCGATATCTGCTCAACTGAGATGAAAAGGATACTTGAAATATACAAAGGATACGAAGGAATATCAACTTTGGTTGATGTAGGAGGTGGACATGGACAATGTCTCAAAATGATTATCTCCAAATACCCATCAATAAAGGGAATTAATTTTGACCTCCCACAAGTCATTGAAAATGCACCACACATTCCAGGGATTGAACATGTTGGAGGAAGTATGTTTGAAAGTGTTCCACAAGGGGATGCCATAGTACTAAAGGCCGTGTGCCATAATTGGTCGGATGAAAAATGCATAGAAATTTTAAGCAATTGTCACAAAGCTCTGCCATCAAATGGAAAGGTCATTATTGTGGAGTTCATACTGCCAGAAGATCCAAAACCAACGAATGCATCTAAAATGATTTCACTTCTTGATAACATCATGTTTATCACAGCTGGTGGCGTGGAAAGAACTGAGAAACACTATGAAAGTTTGGGAAAGCGCTCTGGATTTTCTAGGTTTAAATTTGTTTGTTGTGCTTTCTCTATTTTGGGGGTAATGGAGCTTTACAAATAA 1113 0.3953 MGSYSVEKENHVVAPQRDDSHTLSAMVLGANMVFPAALNAAIELKLFEIIAKESSPENGGFMSVFEIASKLPTQHSDLPYRLDRVLRLLASYDLLSVSSRTNEDGSVLRVYGISPSGKYFFFDENSDGYLASFTSFLCHPALSRLWLNFKEAVVDPEIDLFKKVNGISKYEYFGKDAQLNHVFNKSMTDICSTEMKRILEIYKGYEGISTLVDVGGGHGQCLKMIISKYPSIKGINFDLPQVIENAPHIPGIEHVGGSMFESVPQGDAIVLKAVCHNWSDEKCIEILSNCHKALPSNGKVIIVEFILPEDPKPTNASKMISLLDNIMFITAGGVERTEKHYESLGKRSGFSRFKFVCCAFSILGVMELYK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00062 370 PANTHER O-METHYLTRANSFERASE 25 353 IPR016461 GO:0008168
Sebi303g00062 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 367 IPR029063 -
Sebi303g00062 370 FunFam Caffeic acid 3-O-methyltransferase 4 120 - -
Sebi303g00062 370 FunFam Caffeic acid O-methyltransferase 124 370 - -
Sebi303g00062 370 Pfam Dimerisation domain 37 90 IPR012967 GO:0046983
Sebi303g00062 370 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
Sebi303g00062 370 Gene3D Vaccinia Virus protein VP39 123 370 IPR029063 -
Sebi303g00062 370 PIRSF O-mtase 3 370 IPR016461 GO:0008168
Sebi303g00062 370 Gene3D - 2 120 IPR036388 -
Sebi303g00062 370 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
Sebi303g00062 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 370 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00062 Sebi-Chr303 960569 980211 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00062 18 370 Monolignol Biosynthesis Gene Families AT5G54160 49.859 1.90e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00062 - - gmx:100798295 565.074