Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00060 ATGGGTTCCTATTCCATAAATAAAGAGAACAATGTGGTGAGAGATGACAATGATACCCTCTCTGCCATGGTGCTTGGTGCCAATGTGGTCTTTCCTGCAGCACTTAACGCTGCAATTGAACTCAAACTATTTGAGATCATTGCCAAGGAAAGTGATGATGATGGTTTCATGTCAGCCTTTGAAATTGCTTCCAAGCTACCAACCAAACACTCTGATGTACCAAATAGGCTCGACCGTCTCCTGCGTTTGCTTGCTAGTTACTCTCTTCTCACTGTTTCCACTCGCACCAATGAGGATGGTAGCATAGTGAGAGTTTATGGGATCTCACCTTGTGGTAGATATTTCTTCCATGATGAAAATGGTGATGGTAATCTTGCTACATTCACATCATTCTTGTGTCACCGTGCATTGTTTGATGAAGCAATTATTGATCCTGAGGTTGACCTATTCAAGAAAGTTCATGGAACATCTAAGTTTGAGTACTTTGGGAATGATCCAGAAACAAACCACATATTTAACATAGCAATGGCTGATATATGCACATCCCATATGAGAAGAATACTTGAAATATACACAGGATTTGAAGGAATATCAACTTTGGTTGATGTAGCAGGTGGAACTGGACATGGCCTCAAAATGATCATCTCCAAATACCCTTTAATTAAAGGGATTAATTTTGACCTCCCTCAAGTGATTCAAAATGCACCACCATTTATAGGGATTGAGCATGTTGGAGGAAGCATGTTTGAAAGTATTCCACAAGGTGATGCCATAATATTAAAGGCTATATTGCATAACTGGTCAGATGAAAAATGTTTAGAAATTTTAAGCAATTGTCACAAAGCTTTACCAGAAAACGGGAAGGTCATTGTTGGGGAACTTATACTAGCCTGA 894 0.3937 MGSYSINKENNVVRDDNDTLSAMVLGANVVFPAALNAAIELKLFEIIAKESDDDGFMSAFEIASKLPTKHSDVPNRLDRLLRLLASYSLLTVSTRTNEDGSIVRVYGISPCGRYFFHDENGDGNLATFTSFLCHRALFDEAIIDPEVDLFKKVHGTSKFEYFGNDPETNHIFNIAMADICTSHMRRILEIYTGFEGISTLVDVAGGTGHGLKMIISKYPLIKGINFDLPQVIQNAPPFIGIEHVGGSMFESIPQGDAIILKAILHNWSDEKCLEILSNCHKALPENGKVIVGELILA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00060 297 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 297 IPR016461 GO:0008168
Sebi303g00060 297 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Sebi303g00060 297 Gene3D Vaccinia Virus protein VP39 119 297 IPR029063 -
Sebi303g00060 297 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Sebi303g00060 297 Gene3D - 3 115 IPR036388 -
Sebi303g00060 297 PIRSF O-mtase 3 297 IPR016461 GO:0008168
Sebi303g00060 297 Pfam O-methyltransferase domain 144 296 IPR001077 GO:0008171
Sebi303g00060 297 PANTHER O-METHYLTRANSFERASE 22 296 IPR016461 GO:0008168
Sebi303g00060 297 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 294 IPR029063 -
Sebi303g00060 297 SUPERFAMILY "Winged helix" DNA-binding domain 17 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00060 Sebi-Chr303 931394 932676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00060 1 296 Monolignol Biosynthesis Gene Families AT5G54160 48.845 7.38e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00060 - - gmx:100798295 419.853