Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00052 ATGTCCACCTCCACCGCCGCCGATTCCGTCACGGCGGAGCCTCCACCCACGCGTCCCACCATCACTCTCCCCCCACGTCCCTCCGCCGAGGCCTTCTTCGCCGGCGCTGCCAGTCCCGGCCCCATGACCCTCGTCTCTAGCTTCTTCGCCTCCGACGCCGCCACTGACTGCCGCTCCTTCTCCCAGCTCCTCGCCGGAGCTATGGCCTCCCCACTCGCCTTCGCCGCCGCCGCCGACAATACCGCCAAAGAAGACGATGGGACCCACAAGAGCCTCGGCTTCAAGCAGAGCAGACCCATGAACTTGGTCATTGCTCGTTCCCCAATCTTCACAATCCCACCTGGTTTGAGCCCTTCTGGGTTTCTCAACTCACCGGGCTTCTTTTCCCCACAGGAATTTGTGGCTGAGAGCCCCTTTGGGATGTCCCACCAACAGGCTTTAGCACAGGTTACAGCACAAGCTGTCCTAGCACAATCTCAGATGCACATGCAAGCTGATTACCAGCAATCTGCAGTAACAGCTCCCACTGAACCACTGGTAGAACAGCCATCTTTTACTATAAATGAAGCTTCGGAGCAGCAAGTAGTGGCATCTGTATCAGAACCTAGAAATGCTCAACTGGAAACATCAGAGCTTTCACAAGGTGATAAGAAATATCAACCATCTTCCCTGCCCATTGACAAACCTGCTGATGATGGCTACAACTGGCGTAAGTATGGACAGAAGCAGGTTAAAGGGAGTGAGTATCCACGGAGCTACTACAAGTGTACACATCTGAATTGTCCAGTGAAGAAAAAGGTTGAGCGTGCCCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGGGAAATAGGCGTATCAAAGATAATAGTGACTTGAATGGAAATACAAATGTTCAACCTAAGTCTGAATCAAACTCACAAGGTTGGTTTGAAAATGCAAACAAATTTAGTGAAAGCATGCCTGATAGTTCAGTGCCTGAGAGTGACCAGACCTCCAATCAAGGGGCTCCAAGGCAAATGCCTGGATCAAGTGAGAGTGAGGAAGTGGGTGATGTAGATAATAGGGAAGAGGGAGATGACAATGAGCCAAACCCTAAGAGAAGGAACACTGCTGATCTTGTGGTTTCTGAAGTACCTCTGTCTCAGAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGCTACAGGTGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTACTACAAATGCACTAGTGCAGGATGCAATGTGCGTAAACATGTCGAGAGAGCCTCAACAGACCCCAAAGCTGTCATTACTACATATGAGGGAAAACATAATCATGATGTGCCTGCTGCTAGAAACAGCAGCCACAACACAGCTAGTAGTAATTCAATGCCATTAAAACCACATAACGCGGTCCCAGAGAAGCATCCTTTGCTTAAAGATATGGAGTTTGGAAACAGTGACCAGAGACCTGTACATTTACGCTTGAAAGAAGAGCAGATCATAGTATAA 1575 0.4895 MSTSTAADSVTAEPPPTRPTITLPPRPSAEAFFAGAASPGPMTLVSSFFASDAATDCRSFSQLLAGAMASPLAFAAAADNTAKEDDGTHKSLGFKQSRPMNLVIARSPIFTIPPGLSPSGFLNSPGFFSPQEFVAESPFGMSHQQALAQVTAQAVLAQSQMHMQADYQQSAVTAPTEPLVEQPSFTINEASEQQVVASVSEPRNAQLETSELSQGDKKYQPSSLPIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQGNRRIKDNSDLNGNTNVQPKSESNSQGWFENANKFSESMPDSSVPESDQTSNQGAPRQMPGSSESEEVGDVDNREEGDDNEPNPKRRNTADLVVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASSNSMPLKPHNAVPEKHPLLKDMEFGNSDQRPVHLRLKEEQIIV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00052 524 FunFam WRKY transcription factor 218 290 - -
Sebi303g00052 524 MobiDBLite consensus disorder prediction 296 350 - -
Sebi303g00052 524 MobiDBLite consensus disorder prediction 466 489 - -
Sebi303g00052 524 MobiDBLite consensus disorder prediction 280 295 - -
Sebi303g00052 524 MobiDBLite consensus disorder prediction 1 27 - -
Sebi303g00052 524 MobiDBLite consensus disorder prediction 472 488 - -
Sebi303g00052 524 Gene3D WRKY domain 395 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 Gene3D WRKY domain 222 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 MobiDBLite consensus disorder prediction 280 382 - -
Sebi303g00052 524 Pfam WRKY DNA -binding domain 231 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 Pfam WRKY DNA -binding domain 411 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 SUPERFAMILY WRKY DNA-binding domain 402 470 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 SMART WRKY_cls 410 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 SMART WRKY_cls 230 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 FunFam WRKY transcription factor 33 397 463 - -
Sebi303g00052 524 SUPERFAMILY WRKY DNA-binding domain 229 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 MobiDBLite consensus disorder prediction 199 235 - -
Sebi303g00052 524 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 124 485 IPR044810 GO:0003700
Sebi303g00052 524 ProSiteProfiles WRKY domain profile. 405 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi303g00052 524 MobiDBLite consensus disorder prediction 199 220 - -
Sebi303g00052 524 ProSiteProfiles WRKY domain profile. 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00052 Sebi-Chr303 819099 823101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00052 17 522 WRKY Transcription Factor Family AT2G03340 52.778 5.38e-150 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi303g00052 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00052 - - gmx:100796679 865.914