Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00038 ATGGAAGATCAACAGTTGAAACTGCCACCTAGCTTTAGATTTCATCCAACAGATGAAGAGCTCATAAATGATTACCTCGTTAAAAAGGTTGTTGACAATTCCTTCTGTGTTATAGCAATTGCTGAAGTTGATTTGAACAAGTGTGAGCCATGGGATTTTCCTGGGTTTGCTAATATGGGTGAAACAGAATGA 192 0.3802 MEDQQLKLPPSFRFHPTDEELINDYLVKKVVDNSFCVIAIAEVDLNKCEPWDFPGFANMGETE 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00038 63 Gene3D NAC domain 17 63 IPR036093 GO:0003677|GO:0006355
Sebi303g00038 63 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 63 - -
Sebi303g00038 63 SUPERFAMILY NAC domain 5 62 IPR036093 GO:0003677|GO:0006355
Sebi303g00038 63 Pfam No apical meristem (NAM) protein 9 61 IPR003441 GO:0003677|GO:0006355
Sebi303g00038 63 ProSiteProfiles NAC domain profile. 8 63 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00038 Sebi-Chr303 479812 480103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00038 8 63 NAC Transcription Factor Family AT5G53950 71.429 1.01e-24 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi303g00038 NAM 8.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00038 - - gmx:100782172 106.301