Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00037 ATGGAATATCAACAGTTGAAACTGCCACCTACCTATAGATTTCATCCAACAGATGAAGAGCTCATAAATGATTTCCTCGTTAAAAAGGTTCTTGACAACTCCTTCTGTGTTATAGCAATTGCTGAAGTTGATTTGAACAAGTGTGAGCCATGGGATTTTCCTGGCAAAGACAGGGAGATATTCGCGGCAAATGCATTGATTGGGAGAGAATGGGTTATTAGCAGAGTATTTGAAAAGAGTTCTTATGTAAAGAAAATGCATGTTCCAAACTTTGGAAGGTTCAACACCTTTGGAGAGGAACCATCACCTCCTTCTCAATTGCTTCCATTGGCGGATTTTTCTCCATACAACAACATAACAAGAACGACTGCAGCTGATTTGTCTCAATTGATCAACTTCTCCTATCCAAATCAAATGGAGGATCAGAGAGCACAAGATGACATTGTTGATTTCATGGAAGCTCCCATCTTAGCTTTTCAATCTTTAGGACCCTATGATATTTCCCCTTATGCTAAACCAACCCCTGCATTCTCCAACCATTCCACAATGATTGCACAACAAATTGGCCAACCACAGTATCCTGATTATTCTCTGCCTCAAGAACAACCAAAGTTAAGGATTCTAACGGAATATCCTGGATCGAGTTTACAACACATTCAAAAAATAGATTTTTCTCTCGGAACACACTTTAATGTTGACATCTCCCCTGTAACAACCAACAGTGACATGTTTCAAAGGTGGTTTGGGAATCAAGAACATGCATCAGCTTCTACAGGGCCGGTGGACATTGATTGCATGTGGAATTACTAA 810 0.3988 MEYQQLKLPPTYRFHPTDEELINDFLVKKVLDNSFCVIAIAEVDLNKCEPWDFPGKDREIFAANALIGREWVISRVFEKSSYVKKMHVPNFGRFNTFGEEPSPPSQLLPLADFSPYNNITRTTAADLSQLINFSYPNQMEDQRAQDDIVDFMEAPILAFQSLGPYDISPYAKPTPAFSNHSTMIAQQIGQPQYPDYSLPQEQPKLRILTEYPGSSLQHIQKIDFSLGTHFNVDISPVTTNSDMFQRWFGNQEHASASTGPVDIDCMWNY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00037 269 ProSiteProfiles NAC domain profile. 8 155 IPR003441 GO:0003677|GO:0006355
Sebi303g00037 269 SUPERFAMILY NAC domain 4 57 IPR036093 GO:0003677|GO:0006355
Sebi303g00037 269 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 57 - -
Sebi303g00037 269 Pfam No apical meristem (NAM) protein 9 57 IPR003441 GO:0003677|GO:0006355
Sebi303g00037 269 Gene3D NAC domain 17 65 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00037 Sebi-Chr303 466478 467729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00037 6 269 NAC Transcription Factor Family AT5G07680 28.530 6.68e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi303g00037 NAM 9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00037 - - gmx:100782172 248.44