Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00033 ATGGAAGATCAACAGTTGAAACTGCCACCTAGCTTTAGATTTCATCCAACAGATGAAGAGCTCATAATTGATTACCTCGTTAAAAAGGTTGTTGACAACTCATTCTGTGCTATAGCAATTGCTGAAGTTGATTTGAACAAAATATACCTAATTGGTTTAAAGACAAATAGAGCCACTGATGCTGGCTACTGGAAGGCCACAGGCAAAGACAGGGAGATATCCACGGCAAATGCATTGATTGGGAGAGAATGGGTTATTAGCAAAGTATTTGAAAAGAGTTCTTGTGTAAAGAAAATGCATGTTCCAAACTTTGGAAGGTTCAACACCTTTGGAGAGGAACCATCACCTCCTTCTCAATTGCTTCCATTGGCGGATTTTTCTCCATACAACAACATAACAAGAACGACTGTAGGTGATTTGTCTCAATTGATCAACTTCTCCTATCCAAATCAAATGGAGGATCAGAGAACACAAGATGACATTGTTGATTTCTTGGAAGCTCCCATCTTAGCCTTTCAATCTTTAGGACCCTATGATATTTCCCCTTATGCTAAACAGACCCCTGCATTCTCCAACCACTCCACAATGATTGCACAACAAATTGGCCAACCACAGTATCCTGATTATTCTCTGCCTCAAGAACAACCAAAGTTAAGGATTCTAACCGAATATCCTGGATCGAGTTTACAACACATTCAAAAGATAGATTTTTCTCTCGGAACATACTTTAATTTTGATATCTCCCCTGTAACAACCGACAGTGACATGTTTCAAAGGTGGTTTGGGAATCAAGAACATGCATCAGCTTCTACAGGGCCGGTGGACATTGATTGCTTGTGGAATTACTAA 849 0.3969 MEDQQLKLPPSFRFHPTDEELIIDYLVKKVVDNSFCAIAIAEVDLNKIYLIGLKTNRATDAGYWKATGKDREISTANALIGREWVISKVFEKSSCVKKMHVPNFGRFNTFGEEPSPPSQLLPLADFSPYNNITRTTVGDLSQLINFSYPNQMEDQRTQDDIVDFLEAPILAFQSLGPYDISPYAKQTPAFSNHSTMIAQQIGQPQYPDYSLPQEQPKLRILTEYPGSSLQHIQKIDFSLGTYFNFDISPVTTDSDMFQRWFGNQEHASASTGPVDIDCLWNY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00033 282 SUPERFAMILY NAC domain 5 85 IPR036093 GO:0003677|GO:0006355
Sebi303g00033 282 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 47 - -
Sebi303g00033 282 Pfam No apical meristem (NAM) protein 9 47 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00033 Sebi-Chr303 460015 461259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00033 6 282 NAC Transcription Factor Family AT5G07680 32.174 9.81e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi303g00033 NAM 7.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00033 - - gmx:100782172 274.633